RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 TTC34A8MYJ7 566 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 CATP04040 527 aaKnown RBP8.54□□□□□ -1.04
HCG18-238ENST00000449544 SRPRAP08240 638 aaKnown RBP8.54□□□□□ -1.04
HCG18-238ENST00000449544 FDFT1P37268 417 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 GRK6P43250 576 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 TGM3Q08188 693 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 SLC5A9Q2M3M2 681 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 PARGQ86W56 976 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 LINC01465Q8N7H1 131 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 RTL3Q8N8U3 475 aaKnown RBP8.54□□□□□ -1.04
HCG18-238ENST00000449544 CLIP3Q96DZ5 547 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 IER2Q9BTL4 223 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.54□□□□□ -1.04
HCG18-238ENST00000449544 ABCG8Q9H221 673 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 GOLPH3Q9H4A6 298 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 CEP250Q9BV73 2442 aa8.54□□□□□ -1.04
HCG18-238ENST00000449544 TSPAN6O43657 245 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 DFNA5O60443 496 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ACP5P13686 325 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 AGXTP21549 392 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 NUDT1P36639 197 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 MSH2P43246 934 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ATP1A2P50993 1020 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 CLCN6P51797 869 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 RAP1GDS1P52306 607 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ENPEPQ07075 957 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 INCA1Q0VD86 236 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 IMPG1Q17R60 797 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 MYLK3Q32MK0 819 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 COBLL1Q53SF7 1204 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 RNF10Q8N5U6 811 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 SNX31Q8N9S9 440 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 DEFB124Q8NES8 71 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 GPR156Q8NFN8 814 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PJA1Q8NG27 643 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 JOSD2Q8TAC2 188 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 LCN9Q8WX39 176 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 NAT6Q93015 286 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 NUS1Q96E22 293 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 DYRK1BQ9Y463 629 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 A6NNZ2 444 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ZNF839A8K0R7 811 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PRAMEF26H0Y7S4 382 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 RNF103O00237 685 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 DCLK1O15075 740 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 GMNNO75496 209 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PPP1R37O75864 691 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 F11P03951 625 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 TAC1P20366 129 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 HNRNPA2B1P22626 353 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 HTR7P34969 479 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 GPD2P43304 727 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 OTUD4Q01804 1114 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 SATB1Q01826 763 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 MTM1Q13496 603 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 C16orf46Q6P387 395 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 RHBDF2Q6PJF5 856 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PIM3Q86V86 326 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 HTR3CQ8WXA8 447 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 WDR92Q96MX6 357 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 CHP1Q99653 195 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 DUSP23Q9BVJ7 150 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 CPEB1Q9BZB8 566 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 PCDH9Q9HC56 1237 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 TM7SF3Q9NS93 570 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 GFRA2O00451 464 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PSTPIP1O43586 416 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 LEFTY1O75610 366 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 LATS1O95835 1130 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ANXA5P08758 320 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 NR2C2P49116 596 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ZNF132P52740 706 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 RPL7AP62424 266 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 PUM1Q14671 1186 aaKnown RBP eCLIP8.53□□□□□ -1.04
HCG18-238ENST00000449544 NUMA1Q14980 2115 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 XKR4Q5GH76 650 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 PIK3R6Q5UE93 754 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 ZNF571Q7Z3V5 609 aaPredicted RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 GATAD2AQ86YP4 633 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 MYO1HQ8N1T3 1032 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 SUN3Q8TAQ9 357 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 FZD3Q9NPG1 666 aa8.53□□□□□ -1.04
HCG18-238ENST00000449544 INTS7Q9NVH2 962 aaKnown RBP8.53□□□□□ -1.04
HCG18-238ENST00000449544 COL4A1P02462 1669 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 LAMB2P55268 1798 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 UPK3BL1B0FP48 263 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 UPK3BL2E5RIL1 263 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 MYO1DO94832 1006 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 RETP07949 1114 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 TPH1P17752 444 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 ASPHQ12797 758 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 DDX39BQ13838 428 aaKnown RBP8.52□□□□□ -1.04
HCG18-238ENST00000449544 FGL2Q14314 439 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 FNBP1LQ5T0N5 605 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 C4orf22Q6V702 233 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 ARL14Q8N4G2 192 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 ACTL9Q8TC94 416 aa8.52□□□□□ -1.04
HCG18-238ENST00000449544 RERGQ96A58 199 aaPredicted RBP8.52□□□□□ -1.04
HCG18-238ENST00000449544 SLC22A12Q96S37 553 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms