RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 NADK2Q4G0N4 442 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ANKS6Q68DC2 871 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ENPP7Q6UWV6 458 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 TAF8Q7Z7C8 310 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ATP6V0D2Q8N8Y2 350 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 PRMT1Q99873 361 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 HEPHQ9BQS7 1158 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 C1QTNF7Q9BXJ2 289 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 UNKQ9C0B0 810 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 PDZD2O15018 2839 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 B4E171 279 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 SNAP91O60641 907 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 FBXO21O94952 628 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 TNFP01375 233 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 VARSP26640 1264 aaKnown RBP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 HTR1BP28222 390 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 TSPAN7P41732 249 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 CLCN6P51797 869 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 LIMK2P53671 638 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 HLTFQ14527 1009 aaKnown RBP eCLIP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 FBXL22Q6P050 247 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 PMF1Q6P1K2 205 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 TAC4Q86UU9 113 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 FAM129CQ86XR2 697 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 TMEM174Q8WUU8 243 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC35F5Q8WV83 523 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 RPRD1AQ96P16 312 aaPredicted RBP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 GBP4Q96PP9 640 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 RBM15Q96T37 977 aaKnown RBP eCLIP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 OCIAD1Q9NX40 245 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 POLHQ9Y253 713 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 FRMD4BQ9Y2L6 1034 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
AC004540.1-204ENST00000449537 SORBS2O94875 1100 aaKnown RBP12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 CD1CP29017 333 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 DNA2P51530 1060 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 PPP3CAQ08209 521 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 ERV3-1Q14264 604 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 UNC13DQ70J99 1090 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 PARS2Q7L3T8 475 aaKnown RBP12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 PSMB7Q99436 277 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 C7orf25Q9BPX7 421 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 MIS12Q9H081 205 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 DPEP2Q9H4A9 486 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 VPS51Q9UID3 782 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 KIAA1257Q9ULG3 409 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
AC004540.1-204ENST00000449537 PRRC2CQ9Y520 2896 aaKnown RBP12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 C16orf96A6NNT2 1141 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 RHPN2P1A8MT19 583 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 B4DGG1 531 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 INPP4BO15327 924 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 PPP6R2O75170 966 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 CLDN11O75508 207 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 TM7SF2O76062 418 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 NR3C1P04150 777 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 VDRP11473 427 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 MAN1A1P33908 653 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 ABL2P42684 1182 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 PMS2P54278 862 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 SYPL2Q5VXT5 272 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 LINGO4Q6UY18 593 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 OR4D9Q8NGE8 314 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 FAM149B1Q96BN6 582 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 ARHGEF26Q96DR7 871 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 RTP4Q96DX8 246 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 KLQ9UEF7 1012 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 MRPS18BQ9Y676 258 aaKnown RBP12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 OAS3Q9Y6K5 1087 aaKnown RBP12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 FBN3Q75N90 2809 aa12.73□□□□□ -0.37
AC004540.1-204ENST00000449537 O00370 1275 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 MMP20O60882 483 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 TRUB2O95900 331 aaKnown RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC2A3P11169 496 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 PTMSP20962 102 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 MPSTP25325 297 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms