RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 NCKIPSDQ9NZQ3 722 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 G3BP2Q9UN86 482 aaKnown RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 MANSC4A6NHS7 340 aaPredicted RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 LPIN1Q14693 890 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 LRRC36Q1X8D7 754 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PIK3R6Q5UE93 754 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 CNSTQ6PJW8 725 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 BNC2Q6ZN30 1099 aaPredicted RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 KDELC2Q7Z4H8 507 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 ZNF683Q8IZ20 524 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 RCN3Q96D15 328 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 IMP4Q96G21 291 aaKnown RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 RANBP9Q96S59 729 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 HEATR9A2RTY3 570 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 RNASEH1O60930 286 aaKnown RBP17.08■□□□□ 0.33
TOM1-210ENST00000449058 TADA2AO75478 443 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 TECRLQ5HYJ1 363 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.33
TOM1-210ENST00000449058 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 PGAM4Q8N0Y7 254 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 SLC39A13Q96H72 371 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 UNKQ9C0B0 810 aaKnown RBP17.08■□□□□ 0.33
TOM1-210ENST00000449058 POMKQ9H5K3 350 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 TLR6Q9Y2C9 796 aa17.08■□□□□ 0.33
TOM1-210ENST00000449058 COPG1Q9Y678 874 aaKnown RBP17.08■□□□□ 0.33
TOM1-210ENST00000449058 TRPC5OSA6NMA1 111 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 TMEM233B4DJY2 109 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 SDHDO14521 159 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 INPPL1O15357 1258 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 PIM1P11309 404 aaPredicted RBP17.08■□□□□ 0.32
TOM1-210ENST00000449058 CTGFP29279 349 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 THOP1P52888 689 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 SLC12A2P55011 1212 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 HUNKP57058 714 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 NKX3-2P78367 333 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
TOM1-210ENST00000449058 MAP3K21Q5TCX8 1036 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 NXNQ6DKJ4 435 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 MSANTD2Q6P1R3 559 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
TOM1-210ENST00000449058 TRAPPC9Q96Q05 1148 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 CDRT15Q96T59 188 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 OLFM1Q99784 485 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 SLC24A3Q9HC58 644 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 PSMD13Q9UNM6 376 aa17.08■□□□□ 0.32
TOM1-210ENST00000449058 UQCRBP14927 111 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 LEPRP48357 1165 aaKnown RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 RENBPP51606 427 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 CLCN5P51795 746 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 NDST2P52849 883 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 AQP4P55087 323 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 RPL26P61254 145 aaKnown RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 PFKPQ01813 784 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SATB1Q01826 763 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 RFTN1Q14699 578 aaPredicted RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 TRIP10Q15642 601 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SLC14A2Q15849 920 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 PCSK7Q16549 785 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 ZNF789Q5FWF6 425 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 OGFRL1Q5TC84 451 aaPredicted RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 PELI3Q8N2H9 469 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 CALML6Q8TD86 181 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SGF29Q96ES7 293 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 C6orf203Q9P0P8 240 aaPredicted RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 PACSIN3Q9UKS6 424 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 PAPSS2O95340 614 aaPredicted RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 PEX19P40855 299 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SERPINH1P50454 418 aaKnown RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 FAM83EQ2M2I3 478 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SH2D4BQ5SQS7 431 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 GALNT7Q86SF2 657 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 MARK4Q96L34 752 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 DDX50Q9BQ39 737 aaKnown RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 VPS45Q9NRW7 570 aa17.07■□□□□ 0.32
TOM1-210ENST00000449058 SPATS2LQ9NUQ6 558 aaKnown RBP17.07■□□□□ 0.32
TOM1-210ENST00000449058 TCAF2A6NFQ2 919 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 NEMP2A6NFY4 417 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 FESP07332 822 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
TOM1-210ENST00000449058 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
TOM1-210ENST00000449058 RHOQP17081 205 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 SULT2A1Q06520 285 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 CEACAM7Q14002 265 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 CSHL1Q14406 222 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms