RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ZWILCHQ9H900 591 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 KCND1Q9NSA2 647 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ALG6Q9Y672 507 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 DOCK4Q8N1I0 1966 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 A0A1W2PQU0 124 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 KPNA3O00505 521 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SPOPO43791 374 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 RNF8O76064 485 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 CNTN5O94779 1100 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 MT-CO1P00395 513 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 THEGLP0DJG4 465 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 MAN1A1P33908 653 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 EIF2S3P41091 472 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 DNA2P51530 1060 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 IRAK1P51617 712 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SEMG2Q02383 582 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC25A11Q02978 314 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 CA9Q16790 459 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 PROX2Q3B8N5 592 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 ALFQ53S48 1182 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SLFN11Q7Z7L1 901 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 ZNF683Q8IZ20 524 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC25A45Q8N413 288 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 DCAF4L2Q8NA75 395 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 KRT35Q92764 455 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 IFT43Q96FT9 208 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 DCBLD2Q96PD2 775 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 HAPLN3Q96S86 360 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 PSMB7Q99436 277 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 SNRNP25Q9BV90 132 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 HDAC8Q9BY41 377 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 VPS51Q9UID3 782 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 CLCA2Q9UQC9 943 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 HS3ST3A1Q9Y663 406 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 PTPRQQ9UMZ3 2332 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 ITPR1Q14643 2758 aa13.98□□□□□ -0.17
PDLIM2-213ENST00000448520 IGSF10Q6WRI0 2623 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 ILVBLA1L0T0 632 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 FANCGO15287 622 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 SIGLEC6O43699 453 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 SNAP91O60641 907 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 PCDH8O95206 1070 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 CTSLP07711 333 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 HNRNPA2B1P22626 353 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 GLDCP23378 1020 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 DGKAP23743 735 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 OR1E1P30953 314 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 IFI16Q16666 785 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 ARSIQ5FYB1 569 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 ERN2Q76MJ5 926 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 PYROXD2Q8N2H3 581 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 OR4C6Q8NH72 309 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 HSPH1Q92598 858 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 FGF11Q92914 225 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 PPP1R16AQ96I34 528 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 FEM1CQ96JP0 617 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 WDR24Q96S15 920 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 IL36AQ9UHA7 158 aa13.97□□□□□ -0.17
PDLIM2-213ENST00000448520 A0A0D9SEW6 157 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 CXorf51AA0A1B0GTR3 108 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 GOLGA6L9A6NEM1 432 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 K7ERQ8 282 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 TK2O00142 265 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 TRIM38O00635 465 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 PRPSAP2O60256 369 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 SDC3O75056 442 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 RARAP10276 462 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 ALPPL2P10696 532 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 ADRA1BP35368 520 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 PCK1P35558 622 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 ACTN2P35609 894 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 GNG11P61952 73 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 DAB2P98082 770 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 INSM1Q01101 510 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 PEX26Q7Z412 305 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 DCBLD1Q8N8Z6 715 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 SNIP1Q8TAD8 396 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 ARRDC3Q96B67 414 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 UBL7Q96S82 380 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 RETREG1Q9H6L5 497 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 EVA1BQ9NVM1 165 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 FZD10Q9ULW2 581 aa13.96□□□□□ -0.17
PDLIM2-213ENST00000448520 LOC400499M0QZD8 3231 aa13.96□□□□□ -0.18
PDLIM2-213ENST00000448520 FAM72CH0Y354 149 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 DDX3YO15523 660 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 SMAD6O43541 496 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 TLX3O43711 291 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 KIF5CO60282 957 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 SRGAP2O75044 1071 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 PIAS2O75928 621 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms