RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 WRAP53Q9BUR4 548 aaKnown RBP28.64■■■□□ 2.18
CBX4-202ENST00000448310 ABCG4Q9H172 646 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 PRORYQ9H606 182 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 USP29Q9HBJ7 922 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 PNMA8BQ9ULN7 279 aaPredicted RBP28.64■■■□□ 2.18
CBX4-202ENST00000448310 CSNK1G3Q9Y6M4 447 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 CPED1A4D0V7 1026 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 THOP1P52888 689 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 RAD51Q06609 339 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 GUSBP11Q6P575 273 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 CXorf40AQ8TE69 158 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 ERGIC2Q96RQ1 377 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 EPAS1Q99814 870 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 MBNL1Q9NR56 388 aaKnown RBP28.63■■■□□ 2.17
CBX4-202ENST00000448310 EVA1BQ9NVM1 165 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 ANO10Q9NW15 660 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 LHX3Q9UBR4 397 aa28.63■■■□□ 2.17
CBX4-202ENST00000448310 ANKRD62A6NC57 917 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 EIF4E1BA6NMX2 242 aaKnown RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 USP12O75317 370 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 TM7SF2O76062 418 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 TIMP2P16035 220 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 CDK11BP21127 795 aaKnown RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 YBEYP58557 167 aaPredicted RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 SERINC3Q13530 473 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 C1orf61Q13536 156 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 INO80DQ53TQ3 878 aaPredicted RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 PPP1R15BQ5SWA1 713 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 EFL1Q7Z2Z2 1120 aaKnown RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 CASKIN2Q8WXE0 1202 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 APOBEC3BQ9UH17 382 aaKnown RBP28.62■■■□□ 2.17
CBX4-202ENST00000448310 ANKRD36A6QL64 1941 aa28.62■■■□□ 2.17
CBX4-202ENST00000448310 GCATO75600 419 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 PIGNO95427 931 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 TGM2P21980 687 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 GABREP78334 506 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 OGDHQ02218 1023 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 CYTH1Q15438 398 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 STX1AQ16623 288 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 KLHL40Q2TBA0 621 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 CRTC1Q6UUV9 634 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 APTXQ7Z2E3 356 aaKnown RBP28.61■■■□□ 2.17
CBX4-202ENST00000448310 PHACTR4Q8IZ21 702 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 TP53I13Q8NBR0 393 aaPredicted RBP28.61■■■□□ 2.17
CBX4-202ENST00000448310 NAF1Q96HR8 494 aaKnown RBP28.61■■■□□ 2.17
CBX4-202ENST00000448310 FCRL3Q96P31 734 aaPredicted RBP28.61■■■□□ 2.17
CBX4-202ENST00000448310 UBL7Q96S82 380 aaPredicted RBP28.61■■■□□ 2.17
CBX4-202ENST00000448310 IL12RB2Q99665 862 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 CNPY3Q9BT09 278 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 HSD3B7Q9H2F3 369 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 CATSPERBQ9H7T0 1116 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 GPATCH2LQ9NWQ4 482 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 SPASTQ9UBP0 616 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 COQ6Q9Y2Z9 468 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 MFHAS1Q9Y4C4 1052 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 KIF26BQ2KJY2 2108 aa28.61■■■□□ 2.17
CBX4-202ENST00000448310 WASH4PA8MWX3 477 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 PTK2BQ14289 1009 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 PARP15Q460N3 678 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 PRRT3Q5FWE3 981 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 DCUN1D2Q6PH85 259 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 SPACA3Q8IXA5 215 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 MCOLN2Q8IZK6 566 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 UMODL1-AS1Q8N2C9 162 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 BTN2A2Q8WVV5 523 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 NCAPGQ9BPX3 1015 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 LRRC61Q9BV99 259 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 TAS2R14Q9NYV8 317 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 DKK3Q9UBP4 350 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 SALL4Q9UJQ4 1053 aa28.6■■■□□ 2.17
CBX4-202ENST00000448310 ADKP55263 362 aaKnown RBP28.59■■■□□ 2.17
CBX4-202ENST00000448310 TLE3Q04726 772 aa28.59■■■□□ 2.17
CBX4-202ENST00000448310 NCAPHQ15003 741 aa28.59■■■□□ 2.17
CBX4-202ENST00000448310 IRF4Q15306 451 aa28.59■■■□□ 2.17
CBX4-202ENST00000448310 ACAD10Q6JQN1 1059 aa28.59■■■□□ 2.17
CBX4-202ENST00000448310 C1QTNF7Q9BXJ2 289 aa28.59■■■□□ 2.17
CBX4-202ENST00000448310 UBA2Q9UBT2 640 aaPredicted RBP28.59■■■□□ 2.17
CBX4-202ENST00000448310 LRRC10BA6NIK2 292 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 TPP1O14773 563 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 MUSKO15146 869 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 XPAP23025 273 aaPredicted RBP28.58■■■□□ 2.17
CBX4-202ENST00000448310 EIF4A3P38919 411 aaKnown RBP28.58■■■□□ 2.17
CBX4-202ENST00000448310 AIF1P55008 147 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 TPI1P60174 286 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 YPEL5P62699 121 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 NR0B2Q15466 257 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 PERM1Q5SV97 790 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 FAXCQ5TGI0 409 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 CELF6Q96J87 481 aaKnown RBP28.58■■■□□ 2.17
CBX4-202ENST00000448310 LGMNQ99538 433 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 NCKIPSDQ9NZQ3 722 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 LRP4O75096 1905 aa28.58■■■□□ 2.17
CBX4-202ENST00000448310 EME2A4GXA9 379 aaPredicted RBP28.57■■■□□ 2.16
CBX4-202ENST00000448310 TMCO5BA8MYB1 307 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 J3KR12 359 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 CASC3O15234 703 aaKnown RBP28.57■■■□□ 2.16
CBX4-202ENST00000448310 FGF10O15520 208 aaPredicted RBP28.57■■■□□ 2.16
CBX4-202ENST00000448310 PRB1P04280 392 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 ATP1A3P13637 1013 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 FERP16591 822 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms