RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 NOMO1Q15155 1222 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 AGBL4Q5VU57 503 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 TBC1D3GQ6DHY5 549 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 TBC1D3CQ6IPX1 549 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 CDKL3Q8IVW4 592 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 RGL4Q8IZJ4 473 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 TBC1D3Q8IZP1 549 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 ARRDC3Q96B67 414 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 ZNF419Q96HQ0 510 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 VAT1Q99536 393 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 TLR10Q9BXR5 811 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 DKK3Q9UBP4 350 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 PCDHGA5Q9Y5G8 931 aa13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
ERGIC3-209ENST00000447986 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 NEMP1O14524 444 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 SOCS5O75159 536 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 STK10O94804 968 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PIGNO95427 931 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 CR2P20023 1033 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 EIF3EP60228 445 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 CREB5Q02930 508 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PIP5KL1Q5T9C9 394 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 NEK5Q6P3R8 708 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 NCEH1Q6PIU2 408 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 ARMCX6Q7L4S7 300 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 TTC7BQ86TV6 843 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 CAMK1DQ8IU85 385 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PGBD5Q8N414 524 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 DEFB119Q8N690 84 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 LRRN4Q8WUT4 740 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 MAIP1Q8WWC4 291 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 HTR3CQ8WXA8 447 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 RUBCNQ92622 972 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 QKIQ96PU8 341 aaKnown RBP eCLIP13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
ERGIC3-209ENST00000447986 PRR23AA6NEV1 266 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 PLK4O00444 970 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 EPN2O95208 641 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 SERPINF2P08697 491 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 RBP3P10745 1247 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 PTGER3P43115 390 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ELP6Q0PNE2 266 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ZBTB17Q13105 803 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 KLF1Q13351 362 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 TEX44Q53QW1 395 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 KIAA0895LQ68EN5 471 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 RABEPKQ7Z6M1 372 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 SNX19Q92543 992 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 AGAP3Q96P47 875 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 C6orf106Q9H6K1 298 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 NOD2Q9HC29 1040 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 SUSD2Q9UGT4 822 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ATP8A1Q9Y2Q0 1164 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 MUC6Q6W4X9 2439 aa13.21□□□□□ -0.29
ERGIC3-209ENST00000447986 ENC1O14682 589 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 TSPAN6O43657 245 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 AP1G1O43747 822 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 FSBPO95073 299 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 PCDH8O95206 1070 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 GNSP15586 552 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 HOXD12P35452 270 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 EML5Q05BV3 1969 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 ERAP2Q6P179 960 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 DARS2Q6PI48 645 aaKnown RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 SYT12Q8IV01 421 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC41A1Q8IVJ1 513 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 NDUFAF2Q8N183 169 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 PDCD6IPQ8WUM4 868 aaKnown RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 PBKQ96KB5 322 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 KLHL8Q9P2G9 620 aaPredicted RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.3
ERGIC3-209ENST00000447986 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 UPK3BL1B0FP48 263 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms