RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 LRRC57Q8N9N7 239 aa20.74■□□□□ 0.91
PTX4-203ENST00000447419 LRIG1Q96JA1 1093 aa20.74■□□□□ 0.91
PTX4-203ENST00000447419 SUV39H2Q9H5I1 410 aa20.74■□□□□ 0.91
PTX4-203ENST00000447419 GUCA1BQ9UMX6 200 aa20.74■□□□□ 0.91
PTX4-203ENST00000447419 CAPN6Q9Y6Q1 641 aa20.74■□□□□ 0.91
PTX4-203ENST00000447419 CDX4O14627 284 aaPredicted RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 CST8O60676 142 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ZRANB2O95218 330 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTX4-203ENST00000447419 TIMP2P16035 220 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 PECAM1P16284 738 aaPredicted RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 KCNA4P22459 653 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 DPP6P42658 865 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 CCR5P51681 352 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ATXN3P54252 364 aaPredicted RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 IFI16Q16666 785 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 PRAMEF14Q5SWL7 426 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 CFAP58Q5T655 872 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 KDM7AQ6ZMT4 941 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 KATNAL2Q8IYT4 538 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 PDCD6IPQ8WUM4 868 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 WRAP53Q9BUR4 548 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 IL21RQ9HBE5 538 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 NOD2Q9HC29 1040 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 PREBQ9HCU5 417 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 SCUBE2Q9NQ36 999 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 SEPT10Q9P0V9 454 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 PCDHGC4Q9Y5F7 938 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 DCHS1Q96JQ0 3298 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 DCDC2BA2VCK2 349 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 GOLGA8CPA6NN73 597 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 A8MX80 341 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ARHGAP33O14559 1287 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ARHGAP6O43182 974 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 WNT1P04628 370 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 XPAP23025 273 aaPredicted RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 CTNNA1P35221 906 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 AFF3P51826 1226 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 CCDC15Q0P6D6 951 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 AP1B1Q10567 949 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ZNF284Q2VY69 593 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 PRPF39Q86UA1 669 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 MINDY1Q8N5J2 469 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ZNF830Q96NB3 372 aaPredicted RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 HERPUD2Q9BSE4 406 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 CPEB1Q9BZB8 566 aaKnown RBP20.73■□□□□ 0.91
PTX4-203ENST00000447419 KDM4CQ9H3R0 1056 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 ATP13A3Q9H7F0 1226 aa20.73■□□□□ 0.91
PTX4-203ENST00000447419 RBM22Q9NW64 420 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTX4-203ENST00000447419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTX4-203ENST00000447419 RALGAPA1Q6GYQ0 2036 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 hCG_1818297A0A087WSY0 165 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 IGLON5A6NGN9 336 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 PRR5-ARHGAP8B1AHC4 643 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 C10orf142B7Z368 130 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 MATN3O15232 486 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 LATO43561 262 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 RENBPP51606 427 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 ARHGAP8P85298 464 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 BCL2L1Q07817 233 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 ZNF211Q13398 564 aaPredicted RBP20.72■□□□□ 0.91
PTX4-203ENST00000447419 FGL2Q14314 439 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 KIF19Q2TAC6 998 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 NT5DC3Q86UY8 548 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 TRIM69Q86WT6 500 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 HORMAD1Q86X24 394 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 CCDC13Q8IYE1 715 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 RCOR2Q8IZ40 523 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 CCDC112Q8NEF3 446 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 NETO1Q8TDF5 533 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 ALG3Q92685 438 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 MGME1Q9BQP7 344 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 TMEM9BQ9NQ34 198 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 PCDHA3Q9Y5H8 950 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 SNX11Q9Y5W9 270 aa20.72■□□□□ 0.91
PTX4-203ENST00000447419 H0Y8X5 98 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 MMP20O60882 483 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 NEBLO76041 1014 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 PAK4O96013 591 aaPredicted RBP20.71■□□□□ 0.91
PTX4-203ENST00000447419 JCHAINP01591 159 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 CCNB1P14635 433 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 MX2P20592 715 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 CCNCP24863 283 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 SERPINA4P29622 427 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 ID4P47928 161 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 CLDN2P57739 230 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 DSC2Q02487 901 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 ZBTB17Q13105 803 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 PTPRRQ15256 657 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 TFDP3Q5H9I0 405 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 PEX26Q7Z412 305 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 RABEPKQ7Z6M1 372 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 BBS5Q8N3I7 341 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 HDAC11Q96DB2 347 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 SEMA3CQ99985 751 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 FAM118BQ9BPY3 351 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 PCDH12Q9NPG4 1184 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 ANKRD6Q9Y2G4 727 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 COQ6Q9Y2Z9 468 aa20.71■□□□□ 0.91
PTX4-203ENST00000447419 ZNF487B1APH4 448 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms