RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 C9orf16Q9BUW7 83 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MRPS26Q9BYN8 205 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 RETREG1Q9H6L5 497 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 PNMA8CA0A1B0GUJ8 204 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 WDR27A2RRH5 827 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 VIPP01282 170 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 TPP2P29144 1249 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 GLRBP48167 497 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 IRX1P78414 480 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MEA1Q16626 185 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MACC1Q6ZN28 852 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 PEG10Q86TG7 708 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 C17orf64Q86WR6 236 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CDHR5Q9HBB8 845 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ROBO1Q9Y6N7 1651 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 BCLAF3A2AJT9 711 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 TOP3AQ13472 1001 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CAPN13Q6MZZ7 669 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ARHGEF19Q8IW93 802 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CERS5Q8N5B7 392 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SHC3Q92529 594 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CERS2Q96G23 380 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SLC38A2Q96QD8 506 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SEMA3CQ99985 751 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 BLOC1S4Q9NUP1 217 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 NFKBIL1Q9UBC1 381 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF214Q9UL59 606 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 OR10H1Q9Y4A9 318 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 A0A0B4J269 797 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SEC24DO94855 1032 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 COL6A2P12110 1019 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CCNFP41002 786 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 VAC14Q08AM6 782 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 E2F4Q16254 413 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ARMCX4Q5H9R4 360 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 C7orf61Q8IZ16 206 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ATG4AQ8WYN0 398 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 MAFFQ9ULX9 164 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 MYOM1P52179 1685 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CMPK1P30085 196 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SP2Q02086 613 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CDK18Q07002 472 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ILF3Q12906 894 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 PMF1Q6P1K2 205 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 HDDC3Q8N4P3 179 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SPPL2AQ8TCT8 520 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SLC22A18Q96BI1 424 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TEFMQ96QE5 360 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SLC9A7Q96T83 725 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SAR1AQ9NR31 198 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ARHGAP20Q9P2F6 1191 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ARVCFO00192 962 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CYP7B1O75881 506 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 FLT3P36888 993 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 FUT11Q495W5 492 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 RALGPS1Q5JS13 557 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 EOGTQ5NDL2 527 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 LDLRAP1Q5SW96 308 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 N4BP2L1Q5TBK1 243 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ARHGAP17Q68EM7 881 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NIPAL1Q6NVV3 410 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TMPRSS6Q8IU80 811 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 GALNT13Q8IUC8 556 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 FAM20CQ8IXL6 584 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 C12orf50Q8NA57 414 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NELL1Q92832 810 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ZBTB45Q96K62 511 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 UBP1Q9NZI7 540 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 HCN3Q9P1Z3 774 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 PCYOX1Q9UHG3 505 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SQORQ9Y6N5 450 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 MYH3P11055 1940 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 LRRC10BA6NIK2 292 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 GTPBP1O00178 669 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ENTPD5O75356 428 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NFKB1P19838 968 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 PSMD4P55036 377 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ATP13A4Q4VNC1 1196 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 INO80DQ53TQ3 878 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 WDR36Q8NI36 951 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CAPN14A8MX76 684 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CCDC159P0C7I6 412 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 DUSP4Q13115 394 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF549Q6P9A3 640 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 IL27RAQ6UWB1 636 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ANKS1BQ7Z6G8 1248 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 OR4L1Q8NH43 312 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF398Q8TD17 642 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 DNAJC9Q8WXX5 260 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 RXFP1Q9HBX9 757 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms