RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
RBM39-216ENST00000444878 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
RBM39-216ENST00000444878 LOC285095A0A1B0GVY8 99 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 PRRG1O14668 218 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 CCDC22O60826 627 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 TRIM13O60858 407 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 STC2O76061 302 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 KLKB1P03952 638 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
RBM39-216ENST00000444878 COL6A2P12110 1019 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 MNAT1P51948 309 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 PGGT1BP53609 377 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 MSLNQ13421 630 aaPredicted RBP13.8□□□□□ -0.2
RBM39-216ENST00000444878 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 ELMO2Q96JJ3 720 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 SCYL1Q96KG9 808 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 SORT1Q99523 831 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 C1QTNF1Q9BXJ1 281 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 ACE2Q9BYF1 805 aaPredicted RBP13.8□□□□□ -0.2
RBM39-216ENST00000444878 NOD2Q9HC29 1040 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
RBM39-216ENST00000444878 LAMA2P24043 3122 aaKnown RBP13.8□□□□□ -0.2
RBM39-216ENST00000444878 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 MUSKO15146 869 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 CLDN11O75508 207 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 GJB3O75712 270 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 URODP06132 367 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 SERPINF2P08697 491 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ATXN1LP0C7T5 689 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 IRF1P10914 325 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 CALB2P22676 271 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 HOXD9P28356 352 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 CRABP2P29373 138 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ELF1P32519 619 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 SLC12A2P55011 1212 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 SUGP1Q8IWZ8 645 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.79□□□□□ -0.2
RBM39-216ENST00000444878 OR13J1Q8NGT2 312 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 OR6Y1Q8NGX8 325 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 KCTD4Q8WVF5 259 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 UTP4Q969X6 686 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 VWCEQ96DN2 955 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 EBF4Q9BQW3 602 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 MROH6A6NGR9 719 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 TK2O00142 265 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 ESRRAP11474 423 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 HLA-DPA1P20036 260 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 DNAJB1P25685 340 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 RFC2P35250 354 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 GLRBP48167 497 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 OXCT1P55809 520 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 PRAMEP78395 509 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 ZNF460Q14592 562 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ADGRF1Q5T601 910 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 CEP97Q8IW35 865 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 OR52K2Q8NGK3 314 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 OR6P1Q8NGX9 317 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 ZNF689Q96CS4 500 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 TRMT2BQ96GJ1 504 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 FEM1CQ96JP0 617 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 PRICKLE1Q96MT3 831 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 HERC2P3Q9BVR0 1158 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 STN1Q9H668 368 aaKnown RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 OXSMQ9NWU1 459 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
RBM39-216ENST00000444878 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 PCDHB12Q9Y5F1 795 aa13.79□□□□□ -0.2
RBM39-216ENST00000444878 A8MUI8 341 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 H3BNC9 293 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 AURKAO14965 403 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 CHUKO15111 745 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 HSPA4LO95757 839 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 EPOP01588 193 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 FGF1P05230 155 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 RHOCP08134 193 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 CLTBP09497 229 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 ARRB2P32121 409 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 TAS2R39P59534 338 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 POU4F1Q01851 419 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 TWF1Q12792 350 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 CNSTQ6PJW8 725 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms