RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 EPHB1P54762 984 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ADPRHP54922 357 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 MAXP61244 160 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 CREB5Q02930 508 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ELP6Q0PNE2 266 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PRKD1Q15139 912 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-208ENST00000444533 LONRF2Q1L5Z9 754 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 TEX44Q53QW1 395 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ITPRIPL1Q6GPH6 555 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 CCDC70Q6NSX1 233 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 NEK5Q6P3R8 708 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 NCEH1Q6PIU2 408 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 SLC13A5Q86YT5 568 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-208ENST00000444533 SLC35F6Q8N357 371 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.25□□□□□ -0.13
SSBP3-208ENST00000444533 FAM122AQ96E09 287 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 FEM1CQ96JP0 617 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 HSPA12BQ96MM6 686 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 AGAP3Q96P47 875 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PPP1R2P1Q96PQ5 205 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 HOMER3Q9NSC5 361 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PCDHGA5Q9Y5G8 931 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 CACNA1HO95180 2353 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 CFAP69A5D8W1 941 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 GOLGA6CA6NDK9 693 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 GOLGA6BA6NDN3 693 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 PLRG1O43660 514 aaKnown RBP14.24□□□□□ -0.13
SSBP3-208ENST00000444533 RETP07949 1114 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 GOLGA6DP0CG33 693 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ADCY2Q08462 1091 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 PRPSAP1Q14558 356 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 AGBL4Q5VU57 503 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 DCAF12L1Q5VU92 463 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 KIAA0895LQ68EN5 471 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 PARS2Q7L3T8 475 aaKnown RBP14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ARMCX6Q7L4S7 300 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 PID1Q7Z2X4 250 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 PRPF39Q86UA1 669 aaKnown RBP14.24□□□□□ -0.13
SSBP3-208ENST00000444533 CAMK1DQ8IU85 385 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 DEFB119Q8N690 84 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 FRMD1Q8N878 549 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 LRRN4Q8WUT4 740 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ARRDC3Q96B67 414 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 SKA1Q96BD8 255 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ZNF419Q96HQ0 510 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-208ENST00000444533 IL12RB2Q99665 862 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ADGRE3Q9BY15 652 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 NOD2Q9HC29 1040 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 CD93Q9NPY3 652 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 GOLGA6AQ9NYA3 693 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 SERGEFQ9UGK8 458 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 MUC6Q6W4X9 2439 aa14.24□□□□□ -0.13
SSBP3-208ENST00000444533 SHROOM3Q8TF72 1996 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 CTAGE9A4FU28 777 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 METTL12A8MUP2 240 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 UPK3BL1B0FP48 263 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 PRR5-ARHGAP8B1AHC4 643 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 UPK3BL2E5RIL1 263 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 RNF103O00237 685 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 PLK4O00444 970 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 MUSKO15146 869 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 KCNN4O15554 427 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 TSPAN6O43657 245 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 AP1G1O43747 822 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 FOXD2O60548 495 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 FGGP02679 453 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 HLA-DQB2P05538 268 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 TCP1P17987 556 aaKnown RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 CXCR5P32302 372 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 HOXD12P35452 270 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 RGRP47804 291 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 CCR5P51681 352 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 RPS21P63220 83 aaKnown RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 SGCGQ13326 291 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 SETMARQ53H47 684 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 HS1BP3Q53T59 392 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 PIP5KL1Q5T9C9 394 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 KIAA1161Q6NSJ0 714 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 ADAT2Q7Z6V5 191 aaKnown RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 PGBD5Q8N414 524 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 GPR161Q8N6U8 529 aaKnown RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 CEP76Q8TAP6 659 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 CXorf40AQ8TE69 158 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 RUBCNQ92622 972 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 PIGKQ92643 395 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 IFT43Q96FT9 208 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-208ENST00000444533 C1QTNF7Q9BXJ2 289 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 MIR1-1HGQ9H1L0 117 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 ATP8A1Q9Y2Q0 1164 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 WDFY4Q6ZS81 3184 aa14.23□□□□□ -0.13
SSBP3-208ENST00000444533 GOLGA6L10A0A0M3HER8 536 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 BCLAF3A2AJT9 711 aaKnown RBP14.22□□□□□ -0.13
SSBP3-208ENST00000444533 USP27XA6NNY8 438 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 EPN2O95208 641 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms