RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 HIF1AQ16665 826 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 BEND6Q5SZJ8 279 aaPredicted RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 ARMC3Q5W041 872 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 TMEM215Q68D42 235 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 NAPEPLDQ6IQ20 393 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 LINGO4Q6UY18 593 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 LEKR1Q6ZMV7 388 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 LINC00523Q86TU6 105 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 MREGQ8N565 214 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 SH2D3CQ8N5H7 860 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 PCDH20Q8N6Y1 951 aaKnown RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 CNTNAP3BQ96NU0 1288 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 SERPINB12Q96P63 405 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 TXLNGYQ9BZA5 131 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 CHRDQ9H2X0 955 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 ARFGAP3Q9NP61 516 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 PRMT8Q9NR22 394 aaPredicted RBP13.61□□□□□ -0.23
SF1-210ENST00000443908 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 TTLL3Q9Y4R7 772 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
SF1-210ENST00000443908 ATP9BO43861 1147 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 GSRP00390 522 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 MMP2P08253 660 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 SERPINF2P08697 491 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
SF1-210ENST00000443908 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 ADRA1AP35348 466 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 MAXP61244 160 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 RHOAP61586 193 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 AP1S1P61966 158 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 SKOR1P84550 965 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 DSC2Q02487 901 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 NIPAL4Q0D2K0 466 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 SIM2Q14190 667 aaPredicted RBP13.6□□□□□ -0.23
SF1-210ENST00000443908 E2F5Q15329 346 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 C22orf39Q6P5X5 142 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 KDELC1Q6UW63 502 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 CENPUQ71F23 418 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 ZNF534Q76KX8 674 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
SF1-210ENST00000443908 PDIK1LQ8N165 341 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 NELL1Q92832 810 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 LRRC39Q96DD0 335 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 CHFRQ96EP1 664 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 MSANTD3Q96H12 275 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 SEMA3CQ99985 751 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 ERVW-1Q9UQF0 538 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 F5P12259 2224 aa13.6□□□□□ -0.23
SF1-210ENST00000443908 MUC22E2RYF6 1773 aaPredicted RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 SHISA7A6NL88 538 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 TRIM24O15164 1050 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 INSIG1O15503 277 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 IGSF6O95976 241 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 MT-CYBP00156 380 aaPredicted RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 MT-CO1P00395 513 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 EPOP01588 193 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 NNMTP40261 264 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 CD86P42081 329 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 CTSOP43234 321 aaPredicted RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 SLC6A11P48066 632 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 DNAJC21Q5F1R6 531 aaKnown RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 LAIR1Q6GTX8 287 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 LRRC8BQ6P9F7 803 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 NUDT18Q6ZVK8 323 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 CAND1Q86VP6 1230 aaKnown RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 ATP11CQ8NB49 1132 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 SPATA22Q8NHS9 363 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 MRGPRX2Q96LB1 330 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 RBM15Q96T37 977 aaKnown RBP eCLIP13.59□□□□□ -0.238e-9■□□□□ 8.5
SF1-210ENST00000443908 C8orf33Q9H7E9 229 aaPredicted RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 ARNT2Q9HBZ2 717 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 ELOVL2Q9NXB9 296 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 SLC8A2Q9UPR5 921 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
SF1-210ENST00000443908 NCOR2Q9Y618 2525 aa13.59□□□□□ -0.23
SF1-210ENST00000443908 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
SF1-210ENST00000443908 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
SF1-210ENST00000443908 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.24
SF1-210ENST00000443908 CHURC1-FNTBB4DL54 471 aa13.58□□□□□ -0.24
SF1-210ENST00000443908 F5H423 210 aaPredicted RBP13.58□□□□□ -0.24
SF1-210ENST00000443908 K7ERQ8 282 aa13.58□□□□□ -0.24
SF1-210ENST00000443908 SMAD6O43541 496 aaKnown RBP13.58□□□□□ -0.24
SF1-210ENST00000443908 ZNF821O75541 412 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms