RNA–Protein interactions for RNA: ENST00000442736.2

IGKV1D-35-201, Transcript of immunoglobulin kappa variable 1D-35 (pseudogene), humanhuman

BASIC

Gene IGKV1D-35, Length 271 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-35-201ENST00000442736 RXRGP48443 463 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 MARCKSL1P49006 195 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ARSEP51690 589 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 TERF1P54274 439 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 YWHAZP63104 245 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SLC25A11Q02978 314 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 IFRD2Q12894 506 aaPredicted RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ENPP2Q13822 863 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ZNF234Q14588 700 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 TAZQ16635 292 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 OTUD1Q5VV17 481 aaPredicted RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 RSRC2Q7L4I2 434 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 STRADAQ7RTN6 431 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 POLNQ7Z5Q5 900 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SCD5Q86SK9 330 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SPATS2Q86XZ4 545 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 KATNAL2Q8IYT4 538 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 NUP93Q8N1F7 819 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ZNF276Q8N554 614 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 OXR1Q8N573 874 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ZNF366Q8N895 744 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 CCDC168Q8NDH2 2452 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 OR4C6Q8NH72 309 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 WDR36Q8NI36 951 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SCAMP5Q8TAC9 235 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 FAM71BQ8TC56 605 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 PDCD6IPQ8WUM4 868 aaKnown RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 PGAP3Q96FM1 320 aaPredicted RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 TTLL2Q9BWV7 592 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 CASS4Q9NQ75 786 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 PLK2Q9NYY3 685 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 THAP10Q9P2Z0 257 aaPredicted RBP8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SCML2Q9UQR0 700 aa8.84□□□□□ -0.99
IGKV1D-35-201ENST00000442736 SHANK1Q9Y566 2161 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 C3orf70A6NLC5 250 aaPredicted RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 TLR4O00206 839 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 CTIFO43310 598 aaKnown RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SPOPO43791 374 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 GRAP2O75791 330 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 TRUB2O95900 331 aaKnown RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 IGLV3-25P01717 112 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 LTFP02788 710 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 ZDHHC11BP0C7U3 371 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 PYGMP11217 842 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 TFE3P19532 575 aaPredicted RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 MIPP30301 263 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 CXCR5P32302 372 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 PGFP49763 221 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SLC5A3P53794 718 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 HDAC4P56524 1084 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 GEN1Q17RS7 908 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 C15orf59Q2T9L4 293 aaPredicted RBP8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SLC25A52Q3SY17 297 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 RAB6CQ53S08 254 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SYPL2Q5VXT5 272 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 TXNRD3NBQ6F5E7 133 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SERPINA13PQ6UXR4 307 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 ANKS1BQ7Z6G8 1248 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 RHOT1Q8IXI2 618 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 DEFB106AQ8N104 65 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SIX6OS1Q8N1H7 587 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 UBL4BQ8N7F7 174 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 LRRN4CLQ8ND94 238 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 OR2T3Q8NH03 318 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 IFI44Q8TCB0 444 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 SORCS1Q8WY21 1168 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 MARVELD3Q96A59 401 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 P2RY11Q96G91 374 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 CFAP57Q96MR6 1250 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 NCAPGQ9BPX3 1015 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 RAB6CQ9H0N0 254 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 CAAP1Q9H8G2 361 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 POPDC2Q9HBU9 364 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 UCKL1Q9NWZ5 548 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 RRN3Q9NYV6 651 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 TUBD1Q9UJT1 453 aa8.83□□□□□ -1
IGKV1D-35-201ENST00000442736 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 CCDC187A0A096LP49 1063 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 LY6G6EA0A0G2JKS1 128 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 ARHGAP10A1A4S6 786 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 CASC3O15234 703 aaKnown RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 COCHO43405 550 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 RTN3O95197 1032 aaPredicted RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 SLU7O95391 586 aaKnown RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 DDAH2O95865 285 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 GP1BAP07359 652 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 CISD3P0C7P0 127 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 SDC4P31431 198 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 PTPN7P35236 360 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 RWDD2BP57060 319 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 RNASE9P60153 205 aaKnown RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 PITX1P78337 314 aaPredicted RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 SIX1Q15475 284 aaPredicted RBP8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 ATP13A4Q4VNC1 1196 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 SNX30Q5VWJ9 437 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 BSPRYQ5W0U4 402 aa8.82□□□□□ -1
IGKV1D-35-201ENST00000442736 MSANTD2Q6P1R3 559 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms