RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 HDAC3O15379 428 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 B4GAT1O43505 415 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PTPN2P17706 415 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
PMS1-213ENST00000441310 ASPAP45381 313 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 TAP1Q03518 808 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 TAZQ16635 292 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PITRM1Q5JRX3 1037 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 AGAP7PQ5VUJ5 663 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 USP43Q70EL4 1123 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PBXIP1Q96AQ6 731 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 ZNF347Q96SE7 839 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 DHX35Q9H5Z1 703 aaKnown RBP16.95■□□□□ 0.3
PMS1-213ENST00000441310 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.95■□□□□ 0.3
PMS1-213ENST00000441310 TXNDC16Q9P2K2 825 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 IFT52Q9Y366 437 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 HES2Q9Y543 173 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 COPG1Q9Y678 874 aaKnown RBP16.95■□□□□ 0.3
PMS1-213ENST00000441310 SNAI1O95863 264 aaPredicted RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 PTPN9P43378 593 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 IFITM3Q01628 133 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 RAB6CQ53S08 254 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 SNX31Q8N9S9 440 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 SH3YL1Q96HL8 342 aaPredicted RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 ZNF641Q96N77 438 aaPredicted RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 RAB6CQ9H0N0 254 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 RSAD1Q9HA92 442 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 SETD4Q9NVD3 440 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 MOCS1Q9NZB8 636 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ANKMY1Q9P2S6 941 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 TCAF1Q9Y4C2 921 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 HEATR9A2RTY3 570 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CCNA1P78396 465 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 OCA2Q04671 838 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ZNF846Q147U1 533 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ZNF792Q3KQV3 632 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ZNF667Q5HYK9 610 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CES3Q6UWW8 571 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 MMAAQ8IVH4 418 aaKnown RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 LRRC39Q96DD0 335 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 FAR2Q96K12 515 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 SUCOQ9UBS9 1254 aaKnown RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 USP18Q9UMW8 372 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CARD8Q9Y2G2 431 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 BRCA2P51587 3418 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 TNFRSF10AO00220 468 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 GCATO75600 419 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 PIGNO95427 931 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 EIF2S1P05198 315 aaKnown RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 ENO2P09104 434 aaPredicted RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 PROZP22891 400 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ZNF132P52740 706 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 SESN2P58004 480 aaPredicted RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 ENPEPQ07075 957 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 PTPN20Q4JDL3 420 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 ABRAXAS1Q6UWZ7 409 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CALML6Q8TD86 181 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CDKL2Q92772 493 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CSF3RQ99062 836 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 BEGAINQ9BUH8 593 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
PMS1-213ENST00000441310 PSME2Q9UL46 239 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 CDYLQ9Y232 598 aa16.94■□□□□ 0.3
PMS1-213ENST00000441310 TRIM64BA6NI03 449 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 PAPSS1O43252 624 aaPredicted RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 MSI1O43347 362 aaKnown RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 GAS2O43903 313 aaKnown RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 TRIM13O60858 407 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 TADA2AO75478 443 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 IL18RAPO95256 599 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 HNRNPFP52597 415 aaKnown RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 IRF9Q00978 393 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 CYP2U1Q7Z449 544 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 ITIH5Q86UX2 942 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 PQLC3Q8N755 202 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 CXorf38Q8TB03 319 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 SNX19Q92543 992 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 TP63Q9H3D4 680 aaPredicted RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 CYTH4Q9UIA0 394 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 CNTN6Q9UQ52 1028 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 E2F2Q14209 437 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 STILQ15468 1287 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 DLG2Q15700 870 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 EPHX4Q8IUS5 362 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 ANKFN1Q8N957 763 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 CMASQ8NFW8 434 aaPredicted RBP16.93■□□□□ 0.3
PMS1-213ENST00000441310 SNX15Q9NRS6 342 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 GPATCH2LQ9NWQ4 482 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 WARS2Q9UGM6 360 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms