RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 SYCE3A1L190 88 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 TAF4O00268 1085 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 DDX3XO00571 662 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 TRIM38O00635 465 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 SCAMP1O15126 338 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 RAD51BO15315 384 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 PALMO75781 387 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CSF2P04141 144 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 SKILP12757 684 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 NME1P15531 152 aaKnown RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 MIPP30301 263 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 PAPOLAP51003 745 aaKnown RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 YPEL5P62699 121 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CYP4F3Q08477 520 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CAMK2BQ13554 666 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 FZD2Q14332 565 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 RFTN1Q14699 578 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CYTH1Q15438 398 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 KLHL40Q2TBA0 621 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 BRAT1Q6PJG6 821 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 SYN2Q92777 582 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 EXOC2Q96KP1 924 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 KLF6Q99612 283 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CINPQ9BW66 212 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-204ENST00000439619 SUV39H2Q9H5I1 410 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 ATP13A3Q9H7F0 1226 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 GPR27Q9NS67 375 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 UCKL1Q9NWZ5 548 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 GGT7Q9UJ14 662 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 CSNK1G3Q9Y6M4 447 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 DOCK4Q8N1I0 1966 aa19.02■□□□□ 0.64
CCDC78-204ENST00000439619 KNL1Q8NG31 2342 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 A0A1W2PQJ5 194 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 H3BRJ5 948 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 DFFAO00273 331 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 MMP20O60882 483 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 CKMT1AP12532 417 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 SERPINA4P29622 427 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 PCK1P35558 622 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 ARL4AP40617 200 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 HCAR3P49019 387 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 UBASH3AP57075 661 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 PFN3P60673 137 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 FANCCQ00597 558 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 TARDBPQ13148 414 aaKnown RBP eCLIP19.01■□□□□ 0.63
CCDC78-204ENST00000439619 BOLA3Q53S33 107 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 ZNF542PQ5EBM4 170 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 MARCH9Q86YJ5 346 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 CACTIN-AS1Q8N1I8 211 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 FUCA2Q9BTY2 467 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 SLC39A8Q9C0K1 460 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 ISCUQ9H1K1 167 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 CBX8Q9HC52 389 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 LHX3Q9UBR4 397 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 LHX6Q9UPM6 363 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 CLCA2Q9UQC9 943 aa19.01■□□□□ 0.63
CCDC78-204ENST00000439619 ASPMQ8IZT6 3477 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 J3KR12 359 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 LRCH4O75427 683 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 TPM3P06753 285 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 TIMP2P16035 220 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 JUNDP17535 347 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 ERCC2P18074 760 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 CSNK1DP48730 415 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 RENBPP51606 427 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 POLR2LP62875 67 aaKnown RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 PIGHQ14442 188 aaPredicted RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 CA9Q16790 459 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 UGP2Q16851 508 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 LRRC73Q5JTD7 316 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 ZCCHC8Q6NZY4 707 aaKnown RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 FAM181AQ8N9Y4 354 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 NETO2Q8NC67 525 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 ZNF548Q8NEK5 533 aaPredicted RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 CENPTQ96BT3 561 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 KCTD15Q96SI1 283 aaPredicted RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 IL12RB2Q99665 862 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 WRAP53Q9BUR4 548 aaKnown RBP19■□□□□ 0.63
CCDC78-204ENST00000439619 ABCG4Q9H172 646 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 PDFQ9HBH1 243 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 SPASTQ9UBP0 616 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 RAXQ9Y2V3 346 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 AK5Q9Y6K8 562 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 CABIN1Q9Y6J0 2220 aa19■□□□□ 0.63
CCDC78-204ENST00000439619 TMEM110-MUSTN1A8MSY1 372 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 AQP9O43315 295 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 PIGNO95427 931 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 SERPING1P05155 500 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 GP1BAP07359 652 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 BLKP51451 505 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 IL10RBQ08334 325 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 LRRC14Q15048 493 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 TMEM52BQ4KMG9 183 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 TMCO4Q5TGY1 634 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
CCDC78-204ENST00000439619 SRLQ86TD4 932 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 LUZP1Q86V48 1076 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 ARFGAP1Q8N6T3 406 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 ATL2Q8NHH9 583 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 RFFLQ8WZ73 363 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms