RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CCR10P46092 362 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 RXRGP48443 463 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 PSME3P61289 254 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 PRAMEP78395 509 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 MRPS6P82932 125 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 RHDQ02161 417 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 BSPRYQ5W0U4 402 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 DCLRE1AQ6PJP8 1040 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 HERC6Q8IVU3 1022 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 SLCO4A1Q96BD0 722 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ATXN7L3BQ96GX2 97 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 PIWIL1Q96J94 861 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 NEURL2Q9BR09 285 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 GPATCH1Q9BRR8 931 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 SNRNP25Q9BV90 132 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 BRD8Q9H0E9 1235 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 RPF2Q9H7B2 306 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 NGRNQ9NPE2 291 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 DUS2Q9NX74 493 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 SUCOQ9UBS9 1254 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 PLXNA4Q9HCM2 1894 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 K7EPI3 171 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ZNF24P17028 368 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TFEBP19484 476 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 GABRB3P28472 473 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 IRF9Q00978 393 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 PPIGQ13427 754 aaKnown RBP eCLIP8.65□□□□□ -1.021e-8■■■□□ 15.2
HPS4-206ENST00000439453 CCDC14Q49A88 953 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 NHSL2Q5HYW2 709 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 NANOGP8Q6NSW7 305 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TMEM53Q6P2H8 277 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 C16orf87Q6PH81 154 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 KCNT2Q6UVM3 1135 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 CES3Q6UWW8 571 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 XKR5Q6UX68 686 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ZBTB49Q6ZSB9 765 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ZNF786Q8N393 782 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TMEM199Q8N511 208 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 UBA3Q8TBC4 463 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ISL2Q96A47 359 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 SGF29Q96ES7 293 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 AGAP3Q96P47 875 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TWNKQ96RR1 684 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 NOL11Q9H8H0 719 aaKnown RBP8.65□□□□□ -1.02
HPS4-206ENST00000439453 RMI1Q9H9A7 625 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 ADAM28Q9UKQ2 775 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 FADS3Q9Y5Q0 445 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 TRIP11Q15643 1979 aa8.65□□□□□ -1.02
HPS4-206ENST00000439453 A0A096LPK6 155 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 H3BMQ9 156 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 PIGNO95427 931 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 VTNP04004 478 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 INHBBP09529 407 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 UGT1A6P19224 532 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 UGT1A1P22309 533 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 UGT1A4P22310 534 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 UGT1A3P35503 534 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 UGT1A5P35504 534 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 GPD2P43304 727 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 HK2P52789 917 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 DCAF6Q58WW2 860 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 TTC33Q6PID6 262 aaPredicted RBP8.65□□□□□ -1.03
HPS4-206ENST00000439453 FAM183BPQ6ZVS7 135 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 PCDH20Q8N6Y1 951 aaKnown RBP8.65□□□□□ -1.03
HPS4-206ENST00000439453 RNF169Q8NCN4 708 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 ADAMTS16Q8TE57 1224 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 TFAP2CQ92754 450 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 ITPKCQ96DU7 683 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 COG8Q96MW5 612 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 QKIQ96PU8 341 aaKnown RBP eCLIP8.65□□□□□ -1.03
HPS4-206ENST00000439453 ZNF670Q9BS34 389 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 DRC3Q9H069 523 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 DHX35Q9H5Z1 703 aaKnown RBP8.65□□□□□ -1.03
HPS4-206ENST00000439453 ARMC7Q9H6L4 198 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 CXorf21Q9HAI6 301 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 NMRAL1Q9HBL8 299 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 OXSMQ9NWU1 459 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 SYBUQ9NX95 663 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 PRKAG2Q9UGJ0 569 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 HMGXB4Q9UGU5 601 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 PTBP2Q9UKA9 531 aaKnown RBP8.65□□□□□ -1.03
HPS4-206ENST00000439453 PCDHGA7Q9Y5G6 932 aa8.65□□□□□ -1.03
HPS4-206ENST00000439453 COPG1Q9Y678 874 aaKnown RBP8.65□□□□□ -1.03
HPS4-206ENST00000439453 CLASP2O75122 1294 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 CKMT2P17540 419 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 SLC7A1P30825 629 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NSUN2Q08J23 767 aaKnown RBP eCLIP8.64□□□□□ -1.03
HPS4-206ENST00000439453 ATP1A4Q13733 1029 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 HABP4Q5JVS0 413 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 HEATR6Q6AI08 1181 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 EFCAB12Q6NXP0 572 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 DEFB128Q7Z7B8 93 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 LPGAT1Q92604 370 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CERS2Q96G23 380 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms