RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 SLC13A5Q86YT5 568 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 CAMK1DQ8IU85 385 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 CDKL3Q8IVW4 592 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 OR2T34Q8NGX1 318 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 ZNF641Q96N77 438 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 SUV39H2Q9H5I1 410 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 R3HDM2Q9Y2K5 976 aaKnown RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 ATP8A1Q9Y2Q0 1164 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 SDK1Q7Z5N4 2213 aa17.08■□□□□ 0.33
TARDBP-203ENST00000439080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-203ENST00000439080 TSPAN11A1L157 253 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 PRR23AA6NEV1 266 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 LRRC72A6NJI9 287 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 MEI4A8MW99 385 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 MTSS1O43312 755 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 SOCS5O75159 536 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 EPN2O95208 641 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 RBP3P10745 1247 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 ABL2P42684 1182 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 WASHC5Q12768 1159 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 LRRC73Q5JTD7 316 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 LYSMD4Q5XG99 296 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 ADAT2Q7Z6V5 191 aaKnown RBP17.08■□□□□ 0.32
TARDBP-203ENST00000439080 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-203ENST00000439080 CNTD1Q8N815 330 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 CADM4Q8NFZ8 388 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 FOXJ1Q92949 421 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 AGAP3Q96P47 875 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 C10orf88Q9H8K7 445 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 DKK3Q9UBP4 350 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 ATXN2Q99700 1313 aaKnown RBP17.08■□□□□ 0.32
TARDBP-203ENST00000439080 OTOGLQ3ZCN5 2332 aa17.08■□□□□ 0.32
TARDBP-203ENST00000439080 TRPM6Q9BX84 2022 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 TRAFD1O14545 582 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-203ENST00000439080 RBL1P28749 1068 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 PPP2CBP62714 309 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 PPP2CAP67775 309 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 TRAF2Q12933 501 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 TEX44Q53QW1 395 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 CYP2U1Q7Z449 544 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ZSWIM9Q86XI8 627 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ARRDC2Q8TBH0 407 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ATG4AQ8WYN0 398 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 SNX19Q92543 992 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ECHDC3Q96DC8 303 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 PREBQ9HCU5 417 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 KCND1Q9NSA2 647 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 KLHL8Q9P2G9 620 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-203ENST00000439080 GMEB2Q9UKD1 530 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ITM2BQ9Y287 266 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-203ENST00000439080 GPR179Q6PRD1 2367 aa17.07■□□□□ 0.32
TARDBP-203ENST00000439080 SPINT1O43278 529 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 CEP104O60308 925 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 FSBPO95073 299 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 FGGP02679 453 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 ITPKAP23677 461 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 GNG11P61952 73 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 CREB5Q02930 508 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 NIPAL4Q0D2K0 466 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 KIAA0895LQ68EN5 471 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 DARS2Q6PI48 645 aaKnown RBP17.06■□□□□ 0.32
TARDBP-203ENST00000439080 BRAT1Q6PJG6 821 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 ASCL5Q7RTU5 278 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 PAF1Q8N7H5 531 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 HCAR2Q8TDS4 363 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 PDCD6IPQ8WUM4 868 aaKnown RBP17.06■□□□□ 0.32
TARDBP-203ENST00000439080 RAB7BQ96AH8 199 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 BIRC7Q96CA5 298 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 TEKT5Q96M29 485 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 NCDNQ9UBB6 729 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 PCDHGC4Q9Y5F7 938 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 FADS3Q9Y5Q0 445 aa17.06■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3DA0A087WVF3 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3IA0A087WXS9 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3EA0A087X179 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3KA0A087X1G2 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3FA6NER0 549 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-203ENST00000439080 METTL12A8MUP2 240 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 C10orf142B7Z368 130 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3LB9A6J9 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 KCNN4O15554 427 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 HTRA2O43464 458 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-203ENST00000439080 AP1G1O43747 822 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 CPP00450 1065 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 IGHV4-34P06331 123 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 SERPINF2P08697 491 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3HP0C7X1 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 XPAP23025 273 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms