RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LRP8Q14114 963 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 FAM72AQ5TYM5 149 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 FAM72DQ6L9T8 149 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 ZYG11AQ6WRX3 759 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 CLEC14AQ86T13 490 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 TMEM110Q86TL2 294 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 FAM72BQ86X60 149 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 CASP10Q92851 521 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PPP1R14BQ96C90 147 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-204ENST00000438964 TCF12Q99081 682 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 HNRNPABQ99729 332 aaKnown RBP13.51□□□□□ -0.25
ACTN1-204ENST00000438964 BCO2Q9BYV7 579 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 LTBP1Q14766 1721 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 E2F6O75461 281 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 VDRP11473 427 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 IL7RP16871 459 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 ARL4AP40617 200 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 OPRL1P41146 370 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 RAD23AP54725 363 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DMPKQ09013 629 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 IMPG1Q17R60 797 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 GEN1Q17RS7 908 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 TBPL2Q6SJ96 375 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CELF6Q96J87 481 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CSF3RQ99062 836 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 NCKIPSDQ9NZQ3 722 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 TMA7Q9Y2S6 64 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 FAM32AQ9Y421 112 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CCL22O00626 93 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SRP72O76094 671 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 AHSGP02765 367 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CREB5Q02930 508 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SEPT6Q14141 434 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DNAJC14Q6Y2X3 702 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SPATA22Q8NHS9 363 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DNAJB14Q8TBM8 379 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 HM13Q8TCT9 377 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 MIR1-1HGQ9H1L0 117 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 MRPL46Q9H2W6 279 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 GID8Q9NWU2 228 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 BFARQ9NZS9 450 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 EVPLQ92817 2033 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 NME4O00746 187 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 TRIM24O15164 1050 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DDHD2O94830 711 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 BCL10O95999 233 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 TSPY1Q01534 308 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 ANKRD34AQ69YU3 496 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 MPZL3Q6UWV2 235 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 CNTD1Q8N815 330 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 OR6B3Q8NGW1 331 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 C3orf30Q96M34 536 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 LRRC40Q9H9A6 602 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
ACTN1-204ENST00000438964 SLC2A6Q9UGQ3 507 aa13.5□□□□□ -0.25
ACTN1-204ENST00000438964 DHRS12A0PJE2 317 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 KPNA6O60684 536 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 NOL3O60936 208 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 ALDH2P05091 517 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 INHBBP09529 407 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CCNA2P20248 432 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 TCEA1P23193 301 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 TUBA4AP68366 448 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CYP51A1Q16850 503 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 PYCR3Q53H96 274 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 PPP4R4Q6NUP7 873 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 OTOP3Q7RTS5 596 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 TMEM126BQ8IUX1 230 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 SMG8Q8ND04 991 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 HDAC10Q969S8 669 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 ELMO2Q96JJ3 720 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 EFHD1Q9BUP0 239 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 C1QTNF1Q9BXJ1 281 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 DYNC1LI2O43237 492 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 SYNCRIPO60506 623 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 RSL1D1O76021 490 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CLCQ05315 142 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 LAMC2Q13753 1193 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms