RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GSTM2P28161 218 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 AVPR2P30518 371 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 PNPLA4P41247 253 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 STAT1P42224 750 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZXDBP98169 803 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 ALKBH1Q13686 389 aaKnown RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 GALNT3Q14435 633 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 MMS22LQ6ZRQ5 1243 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC16A12Q6ZSM3 486 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 NRAPQ86VF7 1730 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 HEATR4Q86WZ0 1026 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 ADHFE1Q8IWW8 467 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC25A41Q8N5S1 370 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 ENGASEQ8NFI3 743 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 OIT3Q8WWZ8 545 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 HERVK_113Q902F9 699 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 MIB2Q96AX9 1013 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 THOC3Q96J01 351 aaKnown RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 WDR77Q9BQA1 342 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 REEP2Q9BRK0 252 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 NTPCRQ9BSD7 190 aaKnown RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 CTDSP1Q9GZU7 261 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 RBM38Q9H0Z9 239 aaKnown RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 PLEKHG2Q9H7P9 1386 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 PLAC1Q9HBJ0 212 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 SELENONQ9NZV5 590 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 KLQ9UEF7 1012 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 RGPD3A6NKT7 1758 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 RGPD4Q7Z3J3 1758 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 XRN1Q8IZH2 1706 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TOPAZ1Q8N9V7 1692 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 EIF2AK4Q9P2K8 1649 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CNTNAP1P78357 1384 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TCRBV7S3A2A0A539 114 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 BECN2A8MW95 431 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 HLA-DQA2P01906 255 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 LCATP04180 440 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 NGFRP08138 427 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 HOXC6P09630 235 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 T-ENOLP0DO92 83 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CYP4B1P13584 511 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 PKMP14618 531 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARSBP15848 533 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CD72P21854 359 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CDC25AP30304 524 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 MLH1P40692 756 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 RFX5P48382 616 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 MCM2P49736 904 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TUBP50607 506 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CCR5P51681 352 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ROR2Q01974 943 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CHRNDQ07001 517 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 Q0VFX4 171 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TRPC3Q13507 836 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 DUSP6Q16828 381 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC4A8Q2Y0W8 1093 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 GXYLT1Q4G148 440 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CBWD5Q5RIA9 395 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ATG16L1Q676U5 607 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC30A9Q6PML9 568 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 CTU1Q7Z7A3 348 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 SCN4BQ8IWT1 228 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ESX1Q8N693 406 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM217Q8N7C4 229 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 C7orf57Q8NEG2 295 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 GABPB2Q8TAK5 448 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 BICD2Q8TD16 824 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 C2CD4CQ8TF44 421 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 HVCN1Q96D96 273 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 PPP1R10Q96QC0 940 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 Q9N2J8 555 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM248Q9NWD8 314 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZDHHC7Q9NXF8 308 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC4A4Q9Y6R1 1079 aa3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 COL14A1Q05707 1796 aaKnown RBP3.56□□□□□ -1.84
HMGB3P12-201ENST00000438745 PDE4DIPQ5VU43 2346 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 KCPQ6ZWJ8 1503 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 C10orf71Q711Q0 1435 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 EME2A4GXA9 379 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 CNPP09543 421 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 HNRNPA1P09651 372 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARSAP15289 507 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 XBP1P17861 261 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 PRKCHP24723 683 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 TNFRSF8P28908 595 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 TNFSF8P32971 234 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 SELENOVP59797 346 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARHGAP8P85298 464 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 TRAF1Q13077 416 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 THOC5Q13769 683 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 EFR3AQ14156 821 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 AP5B1Q2VPB7 878 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 ALG10Q5BKT4 473 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 ALG10BQ5I7T1 473 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 SH2D4BQ5SQS7 431 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms