RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 LRRK1Q38SD2 2015 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 SDK1Q7Z5N4 2213 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 MEI4A8MW99 385 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 HACD1B0YJ81 288 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 EPN2O95208 641 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 PTPN3P26045 913 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 PPP2CBP62714 309 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 PPP2CAP67775 309 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 BCL2L1Q07817 233 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 TP53BP1Q12888 1972 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-202ENST00000438552 XRCC4Q13426 336 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 CFAP58Q5T655 872 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 LYSMD4Q5XG99 296 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 ALG1LQ6GMV1 187 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 FBXL19Q6PCT2 694 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 GPR179Q6PRD1 2367 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 CYP2U1Q7Z449 544 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 SLC13A5Q86YT5 568 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-202ENST00000438552 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-202ENST00000438552 OR2T34Q8NGX1 318 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 ATG4AQ8WYN0 398 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 SNX19Q92543 992 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 AGAP3Q96P47 875 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 DOCK9Q9BZ29 2069 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 SUV39H2Q9H5I1 410 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 HAUS2Q9NVX0 235 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 PCDHGC4Q9Y5F7 938 aa16.32■□□□□ 0.2
SNRPB-202ENST00000438552 WDR87Q6ZQQ6 2873 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-202ENST00000438552 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 LRRC72A6NJI9 287 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 SPINT1O43278 529 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 FSBPO95073 299 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 RBP3P10745 1247 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 ITPKAP23677 461 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
SNRPB-202ENST00000438552 RBL1P28749 1068 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 CREB5Q02930 508 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 NIPAL4Q0D2K0 466 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 WASHC5Q12768 1159 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 TRAF2Q12933 501 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 IHHQ14623 411 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 KIAA0895LQ68EN5 471 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 CADM4Q8NFZ8 388 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 ARRDC2Q8TBH0 407 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 HTR3CQ8WXA8 447 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 ZNF641Q96N77 438 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-202ENST00000438552 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 DKK3Q9UBP4 350 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 GGT7Q9UJ14 662 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
SNRPB-202ENST00000438552 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 F5H423 210 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TRAFD1O14545 582 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 MTSS1O43312 755 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 CEP104O60308 925 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 SOCS5O75159 536 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 PRKCGP05129 697 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 IGHV4-34P06331 123 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 GNG11P61952 73 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 CCDC6Q16204 474 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 RALGPS1Q5JS13 557 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 SPDYCQ5MJ68 293 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 PDCD6IPQ8WUM4 868 aaKnown RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 FOXJ1Q92949 421 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 BIRC7Q96CA5 298 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 LOXL4Q96JB6 756 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 WDR24Q96S15 920 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 PCED1AQ9H1Q7 454 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 PREBQ9HCU5 417 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 KLHL8Q9P2G9 620 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-202ENST00000438552 FADS3Q9Y5Q0 445 aa16.3■□□□□ 0.2
SNRPB-202ENST00000438552 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 METTL12A8MUP2 240 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 KCNN4O15554 427 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 HTRA2O43464 458 aaPredicted RBP16.29■□□□□ 0.2
SNRPB-202ENST00000438552 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
SNRPB-202ENST00000438552 CPP00450 1065 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 FGGP02679 453 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 MMP2P08253 660 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 TIMP2P16035 220 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 ITIH2P19823 946 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms