RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 PNPLA8Q9NP80 782 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 FADS3Q9Y5Q0 445 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 USP3Q9Y6I4 520 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 PKD1L1Q8TDX9 2849 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 CCER2I3L3R5 266 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 CCL21O00585 134 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 ZW10O43264 779 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 ATP9BO43861 1147 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 CST3P01034 146 aaPredicted RBP11.26□□□□□ -0.61
RTN4-211ENST00000438462 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 CHRNA3P32297 505 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 PBX1P40424 430 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 NEK3P51956 506 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 YWHAGP61981 247 aaKnown RBP eCLIP11.26□□□□□ -0.61
RTN4-211ENST00000438462 RUNX1T1Q06455 604 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 NNTQ13423 1086 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 ASIC2Q16515 512 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 DUOXA2Q1HG44 320 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 HGSNATQ68CP4 663 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 SCARA5Q6ZMJ2 495 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 CFAP52Q8N1V2 620 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 C12orf29Q8N999 325 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 GRIN3AQ8TCU5 1115 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 ERCC4Q92889 916 aaPredicted RBP11.26□□□□□ -0.61
RTN4-211ENST00000438462 RNF34Q969K3 372 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 PDXPQ96GD0 296 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 TRAPPC9Q96Q05 1148 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
RTN4-211ENST00000438462 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 ZHX3Q9H4I2 956 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 C5AR2Q9P296 337 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
RTN4-211ENST00000438462 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
RTN4-211ENST00000438462 IGHV1OR21-1A0A087WYE8 117 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 TRGV8A0A0C4DH27 118 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 FAM171A2A8MVW0 826 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 ADRB3P13945 408 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 ABCD1P33897 745 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 ZNF131P52739 623 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 KCNK10P57789 538 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 SRP54P61011 504 aaKnown RBP11.25□□□□□ -0.61
RTN4-211ENST00000438462 PPP2R2BQ00005 443 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 LLGL1Q15334 1064 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 DLG2Q15700 870 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 VWA5B1Q5TIE3 1220 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 NADSYN1Q6IA69 706 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 MTFR2Q6P444 385 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 TMEM71Q6P5X7 295 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 ENPP7Q6UWV6 458 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 TRAPPC11Q7Z392 1133 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
RTN4-211ENST00000438462 ACBD4Q8NC06 268 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
RTN4-211ENST00000438462 C21orf140B9A014 251 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 CLIC2O15247 247 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 KIAA0754O94854 1291 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
RTN4-211ENST00000438462 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 BMP6P22004 513 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
RTN4-211ENST00000438462 SLC11A2P49281 568 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 SULT2A1Q06520 285 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 TMIEQ8NEW7 156 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 PLIN2Q99541 437 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 DPYSL5Q9BPU6 564 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
RTN4-211ENST00000438462 MBNL1Q9NR56 388 aaKnown RBP11.24□□□□□ -0.61
RTN4-211ENST00000438462 KLQ9UEF7 1012 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
RTN4-211ENST00000438462 ACSL4O60488 711 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 CDKL5O76039 1030 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 TMEM63AO94886 807 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 CLSTN1O94985 981 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 CLDN14O95500 239 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 PRNPP04156 253 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
RTN4-211ENST00000438462 DSG2Q14126 1118 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 KYNUQ16719 465 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 Q6ZS92 163 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 SYVN1Q86TM6 617 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 CHST14Q8NCH0 376 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 KIAA1524Q8TCG1 905 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 PPP1R16AQ96I34 528 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 TREX2Q9BQ50 279 aaPredicted RBP11.23□□□□□ -0.61
RTN4-211ENST00000438462 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms