RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 VPS36Q86VN1 386 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 OR6C4Q8NGE1 309 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KCTD13Q8WZ19 329 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 STARD8Q92502 1023 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 AKAP7Q9P0M2 348 aaPredicted RBP12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 LRIT1Q9P2V4 623 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 IL36AQ9UHA7 158 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KCND3Q9UK17 655 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 IGHV5-10-1A0A0J9YXX1 117 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 S1PR4O95977 384 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ALPIP09923 528 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CTSEP14091 401 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TCN2P20062 427 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CASP1P29466 404 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 OR1D5P58170 312 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PPP3CAQ08209 521 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 AGERQ15109 404 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KNOP1Q1ED39 458 aaKnown RBP12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 DPY19L3Q6ZPD9 716 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PIM3Q86V86 326 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SCML4Q8N228 414 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CCDC74BQ96LY2 380 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PRMT1Q99873 361 aaKnown RBP12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 IMPG2Q9BZV3 1241 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 VPS28Q9UK41 221 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 FCF1Q9Y324 198 aaKnown RBP12.48□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 F5H5T6 163 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 IKBKBO14920 756 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 FURINP09958 794 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TRIM49P0CI25 452 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TRIM49CP0CI26 452 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 MPSTP25325 297 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ARHGEF7Q14155 803 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ANKS6Q68DC2 871 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 LINGO4Q6UY18 593 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TMEM135Q86UB9 458 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SEMA4DQ92854 862 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KIAA1143Q96AT1 154 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SERPINB11Q96P15 392 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PSMB7Q99436 277 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 DDA1Q9BW61 102 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 DNAI2Q9GZS0 605 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SLC39A1Q9NY26 324 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ITGB1BP2Q9UKP3 347 aa12.47□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TCAF2A6NFQ2 919 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HGSO14964 777 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HNRNPRO43390 633 aaKnown RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 AP1G1O43747 822 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CPNE6O95741 557 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PNLIPP16233 465 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 F8A1P23610 371 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 L1CAMP32004 1257 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 YPEL5P62699 121 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 FBXL22Q6P050 247 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 TP53INP2Q8IXH6 220 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 NRSN1Q8IZ57 195 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 NLGN4XQ8N0W4 816 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 SLC34A3Q8N130 599 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ASB12Q8WXK4 309 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 IRGQQ8WZA9 623 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 PPP1R16AQ96I34 528 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CCDC114Q96M63 670 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HAPLN3Q96S86 360 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 MIS12Q9H081 205 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 CYP4F12Q9HCS2 524 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 HESX1Q9UBX0 185 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 KCTD3Q9Y597 815 aa12.46□□□□□ -0.41
SMAD9-IT1-201ENST00000437983 ESPNB1AK53 854 aa12.45□□□□□ -0.42
SMAD9-IT1-201ENST00000437983 B4DGG1 531 aa12.45□□□□□ -0.42
SMAD9-IT1-201ENST00000437983 DNAJB5O75953 348 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms