RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PAGE1O75459 146 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 TCEA3O75764 348 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PIAS2O75928 621 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 LUC7L3O95232 432 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 SETSIPP0DME0 302 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 SFTPCP11686 197 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 CASP1P29466 404 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 MAT2AP31153 395 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 OXCT1P55809 520 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 TBX4P57082 545 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 DAOAP59103 153 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 HNRNPKP61978 463 aaKnown RBP eCLIP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PPP3CAQ08209 521 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 NFATC3Q12968 1075 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 CUL4BQ13620 913 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 GOLGA7BQ2TAP0 167 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 CYP27C1Q4G0S4 372 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 MS4A13Q5J8X5 152 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 COLEC12Q5KU26 742 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 AGBL4Q5VU57 503 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 KRT39Q6A163 491 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 NADSYN1Q6IA69 706 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 SHC4Q6S5L8 630 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 CLEC14AQ86T13 490 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 DCP2Q8IU60 420 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PLD6Q8N2A8 252 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 KIAA0895Q8NCT3 520 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 WDR48Q8TAF3 677 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 GRIN3AQ8TCU5 1115 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 FBF1Q8TES7 1133 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 OR8D1Q8WZ84 308 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PRICKLE1Q96MT3 831 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 ZNF396Q96N95 335 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 SERPINB11Q96P15 392 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 CCNL2Q96S94 520 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 PPP1R9BQ96SB3 815 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 STARD5Q9NSY2 213 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 UCKL1Q9NWZ5 548 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 TSPAN16Q9UKR8 245 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 KIAA1257Q9ULG3 409 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 SATB2Q9UPW6 733 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 TLR6Q9Y2C9 796 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 NBPF19A0A087WUL8 3843 aa8.63□□□□□ -1.03
NIF3L1-208ENST00000436412 LY6G6EA0A0G2JKS1 128 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 C1QTNF3-AMACRE9PGA6 284 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 K7ESM1 405 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 MCF2LO15068 1137 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 KLRC4O43908 158 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 STX10O60499 249 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 YEATS4O95619 227 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 MYL1P05976 194 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 TRIM49P0CI25 452 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 TRIM49CP0CI26 452 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 GIMD1P0DJR0 217 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 RPL13P26373 211 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 AKT2P31751 481 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 NTF4P34130 210 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 PSMC2P35998 433 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 AFMP43652 599 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 PLK1P53350 603 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 YWHAEP62258 255 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 CNTN1Q12860 1018 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 DCAF6Q58WW2 860 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 FSCBQ5H9T9 825 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 C3orf38Q5JPI3 329 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 ZCCHC8Q6NZY4 707 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 RBM44Q6ZP01 1051 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 MMS22LQ6ZRQ5 1243 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 FAM186BQ8IYM0 893 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 CEP57L1Q8IYX8 460 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 RNF214Q8ND24 703 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 WDR36Q8NI36 951 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 IFI44Q8TCB0 444 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 FRS2Q8WU20 508 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 RPL10LQ96L21 214 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 SEMA3CQ99985 751 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 OSBPL2Q9H1P3 480 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 UPF2Q9HAU5 1272 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 RAB20Q9NX57 234 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 PPM1HQ9ULR3 514 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 MTMR6Q9Y217 621 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 CSNK1G3Q9Y6M4 447 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 U3KQA8 63 aa8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 NYNRINQ9P2P1 1898 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-208ENST00000436412 DOPEY1Q5JWR5 2465 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 POLQO75417 2590 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 FBXO21O94952 628 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 GJB6O95452 261 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 AFPP02771 609 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 LTFP02788 710 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 ITGA2BP08514 1039 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 VDRP11473 427 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 LCP1P13796 627 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 TGM2P21980 687 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 HNRNPA2B1P22626 353 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 NR2F2P24468 414 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 MXI1P50539 228 aa8.61□□□□□ -1.03
NIF3L1-208ENST00000436412 NUCB2P80303 420 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms