RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 CACUL1Q86Y37 369 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 HDDC3Q8N4P3 179 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 CCDC110Q8TBZ0 833 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 RAB7BQ96AH8 199 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 IMP4Q96G21 291 aaKnown RBP16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 KLHL32Q96NJ5 620 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 ADGRE3Q9BY15 652 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 FBXL12Q9NXK8 326 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 FZD4Q9ULV1 537 aa16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 ARIH1Q9Y4X5 557 aaPredicted RBP16.71■□□□□ 0.27
CTDSPL-204ENST00000435525 MIA3Q5JRA6 1907 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 UNC80Q8N2C7 3258 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 K7ESF4 209 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 SLC7A4O43246 635 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 RNASEH2AO75792 299 aaKnown RBP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 KCNJ1P48048 391 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 RPL26P61254 145 aaKnown RBP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 MPP3Q13368 585 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 ANGPT1Q15389 498 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 ERAP2Q6P179 960 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 ERN2Q76MJ5 926 aaKnown RBP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 MAATS1Q7Z4T9 603 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 LONP2Q86WA8 852 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 CAMK1DQ8IU85 385 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 KLHL7Q8IXQ5 586 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 CEP112Q8N8E3 955 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 SPATA4Q8NEY3 305 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 ARRDC2Q8TBH0 407 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 RBM15Q96T37 977 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 LRFN3Q9BTN0 628 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 FSD1LQ9BXM9 530 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 HDAC8Q9BY41 377 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 PCDH9Q9HC56 1237 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 CD248Q9HCU0 757 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 ITM2CQ9NQX7 267 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 POLR3BQ9NW08 1133 aaPredicted RBP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 RPL26L1Q9UNX3 145 aaKnown RBP16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 RAI2Q9Y5P3 530 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
CTDSPL-204ENST00000435525 CTAGE15A4D2H0 777 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 C16orf96A6NNT2 1141 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 ERI2A8K979 691 aaKnown RBP16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 NEMP1O14524 444 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 NDC80O14777 642 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 PIGNO95427 931 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 CPP00450 1065 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 KRT14P02533 472 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 CTSLP07711 333 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 CTAGE8P0CG41 777 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 C7P10643 843 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 GKP32189 559 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 DR1Q01658 176 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 NIPAL4Q0D2K0 466 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 DHX34Q14147 1143 aaKnown RBP16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 SLC36A4Q6YBV0 504 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 CTAGE6Q86UF2 777 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 CTAGE4Q8IX94 777 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 DDX47Q9H0S4 455 aaKnown RBP16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 SGK2Q9HBY8 427 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 C2orf42Q9NWW7 574 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 PCYOX1Q9UHG3 505 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
CTDSPL-204ENST00000435525 A0A1W2PP55 124 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 LRRC72A6NJI9 287 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 MAP3K13O43283 966 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 NDUFS2O75306 463 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 PMPCBO75439 489 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 PSMB4P28070 264 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 CNR2P34972 360 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 TPMTP51580 245 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 GDF10P55107 478 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 SKOR1P84550 965 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 CDK18Q07002 472 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 ELP6Q0PNE2 266 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 ZC3H14Q6PJT7 736 aaKnown RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 USP45Q70EL2 814 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 ZNF572Q7Z3I7 529 aaPredicted RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 KRT12Q99456 494 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 SLC6A17Q9H1V8 727 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 KDM4CQ9H3R0 1056 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 LRRC40Q9H9A6 602 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 RAB6BQ9NRW1 208 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 ZSCAN32Q9NX65 697 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 USP36Q9P275 1121 aaKnown RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 SARDHQ9UL12 918 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 TPX2Q9ULW0 747 aaKnown RBP16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms