RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 STRADBQ9C0K7 418 aa11.76□□□□□ -0.53
CHRNA1-207ENST00000435083 MBNL1Q9NR56 388 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-207ENST00000435083 TMEM51Q9NW97 253 aa11.76□□□□□ -0.53
CHRNA1-207ENST00000435083 IL17BQ9UHF5 180 aa11.76□□□□□ -0.53
CHRNA1-207ENST00000435083 AGRPO00253 132 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 AREL1O15033 823 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 HGFP14210 728 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ETFBP38117 255 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 GABRB2P47870 512 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 INHBCP55103 352 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 BPIFB4P59827 614 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 CCL7P80098 99 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ELOCQ15369 112 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 MYLK3Q32MK0 819 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 C2CD6Q53TS8 623 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ATXN7L2Q5T6C5 722 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 RWDD4Q6NW29 188 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 GDPD4Q6W3E5 623 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 RD3Q7Z3Z2 195 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 XYLT1Q86Y38 959 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 SDR16C5Q8N3Y7 309 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ARL10Q8N8L6 244 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 KYQ8NBH2 561 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 PCDH19Q8TAB3 1148 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 EXTL1Q92935 676 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 TSACCQ96A04 125 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 EPAS1Q99814 870 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 CPEB1Q9BZB8 566 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 SIX2Q9NPC8 291 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 PPARGC1AQ9UBK2 798 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 RABGEF1Q9UJ41 708 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 GPR34Q9UPC5 381 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 PCDHGA7Q9Y5G6 932 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 D6RAR5 112 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 TMX2-CTNND1H3BSU7 103 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 NOBOXO60393 691 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 GSRP00390 522 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 RPLP0P05388 317 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ALPIP09923 528 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 JMJD7P0C870 316 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ITIH2P19823 946 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 SCNN1AP37088 669 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 BLKP51451 505 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ATP11AP98196 1134 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 NFKB2Q00653 900 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 TRNP1Q6NT89 227 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 XKR5Q6UX68 686 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 FSTL5Q8N475 847 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 TP53I13Q8NBR0 393 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 ARHGEF2Q92974 986 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 TMEM74Q96NL1 305 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 WRAP53Q9BUR4 548 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 PISDQ9UG56 409 aa11.75□□□□□ -0.53
CHRNA1-207ENST00000435083 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 GTPBP10A4D1E9 387 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 TOR1BO14657 336 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 RASGRP1O95267 797 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 CDH5P33151 784 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 MTIF2P46199 727 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 HK3P52790 923 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 IRF4Q15306 451 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 TAF3Q5VWG9 929 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 ENPP7Q6UWV6 458 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 ZNF354CQ86Y25 554 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 FAM71AQ8IYT1 594 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 EDEM3Q9BZQ6 932 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 MAGEH1Q9H213 219 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 LRRN3Q9H3W5 708 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 OR12D3Q9UGF7 316 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 COQ6Q9Y2Z9 468 aa11.74□□□□□ -0.53
CHRNA1-207ENST00000435083 CXorf51AA0A1B0GTR3 108 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 TMEM110-MUSTN1A8MSY1 372 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 LIPCP11150 499 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 TIMP2P16035 220 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 RHOQP17081 205 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 MAPKAPK2P49137 400 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 RAD51Q06609 339 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 RAPGEF1Q13905 1077 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 LRRC14Q15048 493 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 CDO1Q16878 200 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 ALG11Q2TAA5 492 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 RAB6CQ53S08 254 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 MANEAQ5SRI9 462 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 ATG14Q6ZNE5 492 aa11.73□□□□□ -0.53
CHRNA1-207ENST00000435083 BNIPLQ7Z465 357 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms