RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PRR5-ARHGAP8B1AHC4 643 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 AREL1O15033 823 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 BCAT2O15382 392 aaPredicted RBP18.58■□□□□ 0.56
HLA-F-220ENST00000434407 MAP3K6O95382 1288 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 NUDT1P36639 197 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 MMP13P45452 471 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 MAPK8P45983 427 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 COPS2P61201 443 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 AP1S1P61966 158 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 PPIDQ08752 370 aaKnown RBP18.58■□□□□ 0.56
HLA-F-220ENST00000434407 TFDP2Q14188 446 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 ZNF235Q14590 738 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 RALGPS1Q5JS13 557 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 MARC1Q5VT66 337 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 ALG1LQ6GMV1 187 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 FBXL19Q6PCT2 694 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 RFX6Q8HWS3 928 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 SYCE1Q8N0S2 351 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 C12orf50Q8NA57 414 aaPredicted RBP18.58■□□□□ 0.56
HLA-F-220ENST00000434407 NSMCE1Q8WV22 266 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 SNX19Q92543 992 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 SPOCK2Q92563 424 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 NUSAP1Q9BXS6 441 aaKnown RBP18.58■□□□□ 0.56
HLA-F-220ENST00000434407 SUV39H2Q9H5I1 410 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 AMACRQ9UHK6 382 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 EFR3BQ9Y2G0 817 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 PCNX2A6NKB5 2137 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 TRAFD1O14545 582 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-220ENST00000434407 SPINT1O43278 529 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 KRT86O43790 486 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 GDF9O60383 454 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 PIGNO95427 931 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 KRT10P13645 584 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 TIMP2P16035 220 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 PTPN7P35236 360 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ABL2P42684 1182 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 NR2C2P49116 596 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 LIMK1P53667 647 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ADCY2Q08462 1091 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 TMEM259Q4ZIN3 620 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 NPNTQ6UXI9 565 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 HORMAD1Q86X24 394 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 CAMK1DQ8IU85 385 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 BBS5Q8N3I7 341 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ZCCHC9Q8N567 271 aaKnown RBP18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ALG3Q92685 438 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ECHDC3Q96DC8 303 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-220ENST00000434407 NUDCD1Q96RS6 583 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 BRD8Q9H0E9 1235 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 MIR1-1HGQ9H1L0 117 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ATP13A3Q9H7F0 1226 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 TM9SF3Q9HD45 589 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 AMFRQ9UKV5 643 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 ZFR2Q9UPR6 939 aaKnown RBP18.57■□□□□ 0.56
HLA-F-220ENST00000434407 HEY1Q9Y5J3 304 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 CAPN6Q9Y6Q1 641 aa18.57■□□□□ 0.56
HLA-F-220ENST00000434407 HTRA2O43464 458 aaPredicted RBP18.56■□□□□ 0.56
HLA-F-220ENST00000434407 CST8O60676 142 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 RNGTTO60942 597 aaKnown RBP18.56■□□□□ 0.56
HLA-F-220ENST00000434407 GJB3O75712 270 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 CCNB1P14635 433 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 TGM2P21980 687 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 SCNN1BP51168 640 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 SUOXP51687 545 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 RWDD2BP57060 319 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 RACK1P63244 317 aaKnown RBP18.56■□□□□ 0.56
HLA-F-220ENST00000434407 PDK1Q15118 436 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 ZNF284Q2VY69 593 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 AASDHQ4L235 1098 aaPredicted RBP18.56■□□□□ 0.56
HLA-F-220ENST00000434407 BRAT1Q6PJG6 821 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 BBS12Q6ZW61 710 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 PEX26Q7Z412 305 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 ZSCAN30Q86W11 494 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 CCDC13Q8IYE1 715 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 PDLIM2Q96JY6 352 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 LGMNQ99538 433 aa18.56■□□□□ 0.56
HLA-F-220ENST00000434407 TMEM131Q92545 1883 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 A0A1W2PQU0 124 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 MIF4GDA9UHW6 222 aaKnown RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 CDX4O14627 284 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 TSPAN6O43657 245 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 NRDCO43847 1150 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 CFIP05156 583 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 CCDC175P0C221 793 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 SERPINA4P29622 427 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 GRIA4P48058 902 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 AFF3P51826 1226 aaKnown RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 IFI35P80217 286 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 KAZNQ674X7 775 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 KIAA1161Q6NSJ0 714 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 BZW1Q7L1Q6 419 aaKnown RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 TTC7BQ86TV6 843 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 PRPF39Q86UA1 669 aaKnown RBP18.55■□□□□ 0.56
HLA-F-220ENST00000434407 ZSWIM9Q86XI8 627 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 NETO1Q8TDF5 533 aa18.55■□□□□ 0.56
HLA-F-220ENST00000434407 LRRN4Q8WUT4 740 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms