RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ATP13A3Q9H7F0 1226 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 PCDHGC4Q9Y5F7 938 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 RAI2Q9Y5P3 530 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 EDDM13A0A1B0GTR0 161 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 SHISA7A6NL88 538 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 WASH3PC4AMC7 463 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 MAN2B1O00754 1011 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 AVILO75366 819 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 EGFP01133 1207 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 CA4P22748 312 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 ENPP2Q13822 863 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 GRM3Q14832 879 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 MLF2Q15773 248 aaPredicted RBP26.73■■□□□ 1.87
TMEM248-205ENST00000433271 ZNF513Q8N8E2 541 aaPredicted RBP26.73■■□□□ 1.87
TMEM248-205ENST00000433271 CAVIN3Q969G5 261 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 IFT43Q96FT9 208 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 APOL2Q9BQE5 337 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 TDRD1Q9BXT4 1180 aaKnown RBP26.73■■□□□ 1.87
TMEM248-205ENST00000433271 ARNT2Q9HBZ2 717 aa26.73■■□□□ 1.87
TMEM248-205ENST00000433271 MUC22E2RYF6 1773 aaPredicted RBP26.73■■□□□ 1.87
TMEM248-205ENST00000433271 ANTXRLA6NF34 631 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 EIF3HO15372 352 aaKnown RBP eCLIP26.72■■□□□ 1.87
TMEM248-205ENST00000433271 IL12RB1P42701 662 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 BCL2L1Q07817 233 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 CDH17Q12864 832 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 SLMAPQ14BN4 828 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 MSS51Q4VC12 460 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 DENND5AQ6IQ26 1287 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 DNAAF3Q8N9W5 541 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 VOPP1Q96AW1 172 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 TRIB3Q96RU7 358 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 ACOX2Q99424 681 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 MTG2Q9H4K7 406 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 E7ESA3 106 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 SOCS5O75159 536 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 DHX9Q08211 1270 aaKnown RBP26.72■■□□□ 1.87
TMEM248-205ENST00000433271 TRAF2Q12933 501 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 SLC1A5Q15758 541 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 DNAJC21Q5F1R6 531 aaKnown RBP26.72■■□□□ 1.87
TMEM248-205ENST00000433271 CAMK1DQ8IU85 385 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 RELL1Q8IUW5 271 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 ZNF366Q8N895 744 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 CHST14Q8NCH0 376 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 HEPHQ9BQS7 1158 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 CACNA2D2Q9NY47 1150 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 SUN2Q9UH99 717 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 STON1Q9Y6Q2 735 aa26.72■■□□□ 1.87
TMEM248-205ENST00000433271 DYNC1I1O14576 645 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 CHRM1P11229 460 aaPredicted RBP26.71■■□□□ 1.87
TMEM248-205ENST00000433271 HLA-EP13747 358 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 PRKCHP24723 683 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 SERPINA4P29622 427 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 GKP32189 559 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 SEC13P55735 322 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 PRKCQQ04759 706 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 PDIA2Q13087 525 aaKnown RBP26.71■■□□□ 1.87
TMEM248-205ENST00000433271 MTM1Q13496 603 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 C9orf64Q5T6V5 341 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 FBXO38Q6PIJ6 1188 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 TMC3Q7Z5M5 1100 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 CHPFQ8IZ52 775 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 ZDHHC6Q9H6R6 413 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 PIH1D1Q9NWS0 290 aaKnown RBP26.71■■□□□ 1.87
TMEM248-205ENST00000433271 WNT16Q9UBV4 365 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 CHKBQ9Y259 395 aa26.71■■□□□ 1.87
TMEM248-205ENST00000433271 TRAFD1O14545 582 aaPredicted RBP26.7■■□□□ 1.86
TMEM248-205ENST00000433271 ALOX15BO15296 676 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 HTRA2O43464 458 aaPredicted RBP26.7■■□□□ 1.86
TMEM248-205ENST00000433271 NDST3O95803 873 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 PRLP01236 227 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 HLA-DPA1P20036 260 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 BBS9Q3SYG4 887 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 SIRPB2Q5JXA9 342 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 ZNF852Q6ZMS4 543 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 LRRC39Q96DD0 335 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 ZNF641Q96N77 438 aaPredicted RBP26.7■■□□□ 1.86
TMEM248-205ENST00000433271 ADGRE3Q9BY15 652 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 TXLNGYQ9BZA5 131 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 SAYSD1Q9NPB0 183 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 BFARQ9NZS9 450 aa26.7■■□□□ 1.86
TMEM248-205ENST00000433271 SDR42E2A6NKP2 422 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 FZD6O60353 706 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 PIGNO95427 931 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 ATXN1LP0C7T5 689 aaKnown RBP26.69■■□□□ 1.86
TMEM248-205ENST00000433271 TIE1P35590 1138 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 CHRNA4P43681 627 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 NPY2RP49146 381 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 SESN2P58004 480 aaPredicted RBP26.69■■□□□ 1.86
TMEM248-205ENST00000433271 FBXO43Q4G163 708 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 BEND6Q5SZJ8 279 aaPredicted RBP26.69■■□□□ 1.86
TMEM248-205ENST00000433271 SLC25A41Q8N5S1 370 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 ANKRD7Q92527 254 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 LRIG1Q96JA1 1093 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 ARFGAP3Q9NP61 516 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 ZDHHC4Q9NPG8 344 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 ARHGEF3Q9NR81 526 aa26.69■■□□□ 1.86
TMEM248-205ENST00000433271 FGF1P05230 155 aa26.68■■□□□ 1.86
TMEM248-205ENST00000433271 CCINQ13939 588 aa26.68■■□□□ 1.86
TMEM248-205ENST00000433271 ARMC12Q5T9G4 340 aa26.68■■□□□ 1.86
TMEM248-205ENST00000433271 UBALD2Q8IYN6 164 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms