RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 KIRREL3Q8IZU9 778 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 LSMEM2Q8N112 164 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 TDRD5Q8NAT2 981 aaKnown RBP14.8□□□□□ -0.04
RFTN1-203ENST00000432519 DTX3LQ8TDB6 740 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 STYXQ8WUJ0 223 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 FAM161BQ96MY7 647 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 THTPAQ9BU02 230 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 CDH19Q9H159 772 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 LRFN2Q9ULH4 789 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 ACOT9Q9Y305 439 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 PDE4DIPQ5VU43 2346 aa14.8□□□□□ -0.04
RFTN1-203ENST00000432519 TMEM233B4DJY2 109 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 DCXO43602 365 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ZDHHC11BP0C7U3 371 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ARSAP15289 507 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 STMN1P16949 149 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 AOC1P19801 751 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 KCNA5P22460 613 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 DNAJB2P25686 324 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 CDC25CP30307 473 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SGSHP51688 502 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SESN3P58005 492 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 RPS24P62847 133 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SLC12A1Q13621 1099 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ZYG11AQ6WRX3 759 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 TMPRSS6Q8IU80 811 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 TEX26Q8N6G2 289 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 OR7D4Q8NG98 312 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 HEXDCQ8WVB3 486 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 WBP2Q969T9 261 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SEMA3CQ99985 751 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SLC38A8A6NNN8 435 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 NEMP1O14524 444 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 GALNT3Q14435 633 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 EPGNQ6UW88 154 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 LRRC49Q8IUZ0 686 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 LGI2Q8N0V4 545 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 EFCAB3Q8N7B9 438 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SPPL2BQ8TCT7 592 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 TTPALQ9BTX7 342 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 UNC93B1Q9H1C4 597 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 GKN1Q9NS71 199 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 DNAJC28Q9NX36 388 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SPECC1L-ADORA2AF8WAN1 911 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 RTN3O95197 1032 aaPredicted RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 PIGNO95427 931 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 PRSS56P0CW18 603 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 TACR2P21452 398 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 EPHA3P29320 983 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 OR1D2P34982 312 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 RGRP47804 291 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 CD151P48509 253 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 NPAS4Q8IUM7 802 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ENDOVQ8N8Q3 282 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 TXNDC5Q8NBS9 432 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ZNF296Q8WUU4 475 aaPredicted RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ANKRD49Q8WVL7 239 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 HDAC10Q969S8 669 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 EXOC2Q96KP1 924 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 MRM3Q9HC36 420 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 G3BP2Q9UN86 482 aaKnown RBP14.79□□□□□ -0.04
RFTN1-203ENST00000432519 ARL5AQ9Y689 179 aa14.79□□□□□ -0.04
RFTN1-203ENST00000432519 LDB2O43679 373 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 SEC24AO95486 1093 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 KLKB1P03952 638 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 CSHL1Q14406 222 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
RFTN1-203ENST00000432519 RCN1Q15293 331 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 LIPMQ5VYY2 423 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 TMEM207Q6UWW9 146 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
RFTN1-203ENST00000432519 NRG4Q8WWG1 115 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 TADA1Q96BN2 335 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 SPATA17Q96L03 361 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 PTDSS1P48651 473 aaKnown RBP14.78□□□□□ -0.04
RFTN1-203ENST00000432519 TMEM198Q66K66 360 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 PIM3Q86V86 326 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 ULK2Q8IYT8 1036 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 OR6P1Q8NGX9 317 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 PTCD2Q8WV60 388 aaKnown RBP14.78□□□□□ -0.04
RFTN1-203ENST00000432519 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 NUF2Q9BZD4 464 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 DRC3Q9H069 523 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 TNFRSF12AQ9NP84 129 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 IGSF5Q9NSI5 407 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 WASF2Q9Y6W5 498 aa14.78□□□□□ -0.04
RFTN1-203ENST00000432519 CHD5Q8TDI0 1954 aa14.77□□□□□ -0.04
RFTN1-203ENST00000432519 HEATR9A2RTY3 570 aa14.77□□□□□ -0.04
RFTN1-203ENST00000432519 MROH6A6NGR9 719 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms