RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RCE1Q9Y256 329 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RAP2CQ9Y3L5 183 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CYP46A1Q9Y6A2 500 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 EVPLQ92817 2033 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CKAP5Q14008 2032 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 A0A087X0M5 115 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 A0A1B0GX30 115 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 A0A1W2PRG0 241 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 LRRC53A6NM62 1247 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ZNF814B7Z6K7 855 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MS4A18H0YCH9 400 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 TAF4O00268 1085 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 LINC01565O15544 149 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ASAP2O43150 1006 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CEP104O60308 925 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 WDHD1O75717 1129 aaPredicted RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 BAIAP3O94812 1187 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 NDUFB4O95168 129 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 EPN2O95208 641 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MBD4O95243 580 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 F9P00740 461 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ADAP00813 363 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 PYGLP06737 847 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 SLC2A4P14672 509 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 PAX3P23760 479 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CNTFP26441 200 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 AVPR2P30518 371 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MAN1A1P33908 653 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CPOXP36551 454 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 AVPR1AP37288 418 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 DPP6P42658 865 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ARSFP54793 590 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CDH12P55289 794 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ZBED6P86452 979 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 EFNB1P98172 346 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ROR2Q01974 943 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 CYP4A11Q02928 519 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 NEXNQ0ZGT2 675 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 PTP4A2Q12974 167 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 VEPH1Q14D04 833 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 SHBQ15464 509 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 TAF11Q15544 211 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 KRT24Q2M2I5 525 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 AP5B1Q2VPB7 878 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ARL13AQ5H913 290 aaPredicted RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 ENTPD8Q5MY95 495 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 DNTTIP2Q5QJE6 756 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 TMEM81Q6P7N7 255 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CPLX2Q6PUV4 134 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 SARM1Q6SZW1 724 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 KIAA1324Q6UXG2 1013 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 B4GALNT4Q76KP1 1039 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 CUZD1Q86UP6 607 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 DENND6AQ8IWF6 608 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 SUGP1Q8IWZ8 645 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 IQCF1Q8N6M8 205 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MCPH1Q8NEM0 835 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MAGEC3Q8TD91 643 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 SMARCE1Q969G3 411 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 SKA1Q96BD8 255 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 KLHL29Q96CT2 875 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 KIF1BPQ96EK5 621 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ZNF419Q96HQ0 510 aaPredicted RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 GFM1Q96RP9 751 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 EYA3Q99504 573 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 TREX2Q9BQ50 279 aaPredicted RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 NTPCRQ9BSD7 190 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 SF3B5Q9BWJ5 86 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 ARHGAP39Q9C0H5 1083 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 PAIP1Q9H074 479 aaKnown RBP2.26□□□□□ -2.05
CDC40-204ENST00000431461 CDT1Q9H211 546 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MROH8Q9H579 483 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 DIAPH3Q9NSV4 1193 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 BABAM1Q9NWV8 329 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ANKRD10Q9NXR5 420 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 PLK2Q9NYY3 685 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 MSRB1Q9NZV6 116 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 HSF4Q9ULV5 492 aa2.26□□□□□ -2.05
CDC40-204ENST00000431461 ZNF644Q9H582 1327 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 TEX13CA0A0J9YWL9 993 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 A0A1W2PPH5 198 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TCRBV7S3A2A0A539 114 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TYW5A2RUC4 315 aaKnown RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 B4E171 279 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 USP17L23D6RBM5 183 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 RTN3O95197 1032 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 AGR2O95994 175 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FGF3P11487 239 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 ARSBP15848 533 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 HOXD3P31249 432 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 ARRB2P32121 409 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TNFSF8P32971 234 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 ARL3P36405 182 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TSPAN7P41732 249 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 LIFRP42702 1097 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 POLD2P49005 469 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 CTCFP49711 727 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 NR1H2P55055 460 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 CASP6P55212 293 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PRAMEP78395 509 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms