RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 CASC3O15234 703 aaKnown RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 MMP20O60882 483 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 IGSF6O95976 241 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 MBD3O95983 291 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 RGRP47804 291 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 AIF1P55008 147 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 YBEYP58557 167 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 RHOAP61586 193 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 DAB2P98082 770 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 PARP15Q460N3 678 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 ZNF571Q7Z3V5 609 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 ZSCAN30Q86W11 494 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 ZNF354CQ86Y25 554 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 FAM181AQ8N9Y4 354 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 CASKIN2Q8WXE0 1202 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 CELF6Q96J87 481 aaKnown RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 KCTD15Q96SI1 283 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 SNRNP25Q9BV90 132 aaKnown RBP16.47■□□□□ 0.23
PTPRA-206ENST00000430705 NRSN2Q9GZP1 204 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 DKK3Q9UBP4 350 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 MYO6Q9UM54 1294 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 CLCA2Q9UQC9 943 aa16.47■□□□□ 0.23
PTPRA-206ENST00000430705 URB1O60287 2271 aaKnown RBP16.46■□□□□ 0.23
PTPRA-206ENST00000430705 FGF10O15520 208 aaPredicted RBP16.46■□□□□ 0.23
PTPRA-206ENST00000430705 MT-CO3P00414 261 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 ITPKBP27987 946 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 TPI1P60174 286 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTPRA-206ENST00000430705 SEMG2Q02383 582 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 SGCGQ13326 291 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 AFMIDQ63HM1 303 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 DCUN1D2Q6PH85 259 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 VPS36Q86VN1 386 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 ARHGAP12Q8IWW6 846 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 NPWQ8N729 165 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 NSMCE3Q96MG7 304 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
PTPRA-206ENST00000430705 WRAP53Q9BUR4 548 aaKnown RBP16.46■□□□□ 0.23
PTPRA-206ENST00000430705 CATSPERBQ9H7T0 1116 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 COQ6Q9Y2Z9 468 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 ANKRD36A6QL64 1941 aa16.46■□□□□ 0.23
PTPRA-206ENST00000430705 TMEM191CA6NGB0 347 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 DDX3XO00571 662 aaKnown RBP eCLIP16.45■□□□□ 0.222e-39■■■■□ 23.1
PTPRA-206ENST00000430705 NEMP1O14524 444 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 AQP9O43315 295 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 OPA1O60313 960 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 BRINP1O60477 761 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-206ENST00000430705 PRAMEF11O60813 436 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 GCATO75600 419 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 PSMA2P25787 234 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 EIF2S3P41091 472 aaKnown RBP16.45■□□□□ 0.22
PTPRA-206ENST00000430705 COL9A2Q14055 689 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-206ENST00000430705 IRF4Q15306 451 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 ARHGAP36Q6ZRI8 547 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 TTC7BQ86TV6 843 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 TP53INP2Q8IXH6 220 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 VCPIP1Q96JH7 1222 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 DCBLD2Q96PD2 775 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 LRRC61Q9BV99 259 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 CPEB1Q9BZB8 566 aaKnown RBP16.45■□□□□ 0.22
PTPRA-206ENST00000430705 SLC39A8Q9C0K1 460 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
PTPRA-206ENST00000430705 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-206ENST00000430705 ATMQ13315 3056 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 A0A1B0GTH6 734 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 ANKRD62A6NC57 917 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 PRKCGP05129 697 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 CELA2BP08218 269 aaPredicted RBP16.44■□□□□ 0.22
PTPRA-206ENST00000430705 ALPPL2P10696 532 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 JUNDP17535 347 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 HTR7P34969 479 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 PRKCIP41743 596 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
PTPRA-206ENST00000430705 NDST2P52849 883 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 E2F1Q01094 437 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 ASIC2Q16515 512 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 KLHL40Q2TBA0 621 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 DEFB133Q30KQ1 61 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 TMEM52BQ4KMG9 183 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 KCTD16Q68DU8 428 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 GUSBP11Q6P575 273 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 SNIP1Q8TAD8 396 aaKnown RBP16.44■□□□□ 0.22
PTPRA-206ENST00000430705 IFI44Q8TCB0 444 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 ARHGEF26Q96DR7 871 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 CLPBQ9H078 707 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 DHX35Q9H5Z1 703 aaKnown RBP16.44■□□□□ 0.22
PTPRA-206ENST00000430705 PARVAQ9NVD7 372 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 PCSK1NQ9UHG2 260 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 CSNK1G3Q9Y6M4 447 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 MGAQ8IWI9 3026 aa16.44■□□□□ 0.22
PTPRA-206ENST00000430705 KNTC1P50748 2209 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 A0A1W2PNU3 283 aaPredicted RBP16.43■□□□□ 0.22
PTPRA-206ENST00000430705 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms