RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 MYBL1P10243 752 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 HTR7P34969 479 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 PCK1P35558 622 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 EIF4A3P38919 411 aaKnown RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 RPS21P63220 83 aaKnown RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 TPM4P67936 248 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 SLC25A11Q02978 314 aaKnown RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 ATP13A4Q4VNC1 1196 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 SLC45A4Q5BKX6 768 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 KIAA1161Q6NSJ0 714 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 Q6ZSR6 202 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 POLNQ7Z5Q5 900 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 KDF1Q8NAX2 398 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 CASKIN2Q8WXE0 1202 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 SKA1Q96BD8 255 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 FEM1CQ96JP0 617 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 NUP85Q9BW27 656 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 CALN1Q9BXU9 219 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 ZWILCHQ9H900 591 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 UBA2Q9UBT2 640 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 KLF15Q9UIH9 416 aa12.67□□□□□ -0.38
SMPD4-204ENST00000430682 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
SMPD4-204ENST00000430682 URB1O60287 2271 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 FAM149AA5PLN7 773 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ENC1O14682 589 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 TSPAN6O43657 245 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 MMP20O60882 483 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 PEX11BO96011 259 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CD48P09326 243 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 IL4RP24394 825 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 AKT2P31751 481 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 HCAR3P49019 387 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 SLC10A7Q0GE19 358 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 OVGP1Q12889 678 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 MMRN1Q13201 1228 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 FZD2Q14332 565 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ASTE1Q2TB18 679 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CCDC122Q5T0U0 273 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ALKBH5Q6P6C2 394 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CAMK1DQ8IU85 385 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 NIPA2Q8N8Q9 360 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 TSC1Q92574 1164 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 HSPH1Q92598 858 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 FUBP1Q96AE4 644 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 TRIM11Q96F44 468 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CNDP2Q96KP4 475 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 WRAP53Q9BUR4 548 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 PCDH18Q9HCL0 1135 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 MRPL47Q9HD33 250 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
SMPD4-204ENST00000430682 KLHL11Q9NVR0 708 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 FTSJ1Q9UET6 329 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ANAPC7Q9UJX3 599 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 ZMIZ1Q9ULJ6 1067 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 COQ6Q9Y2Z9 468 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 HS3ST3A1Q9Y663 406 aa12.66□□□□□ -0.38
SMPD4-204ENST00000430682 FAM208BQ5VWN6 2430 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 TSPAN11A1L157 253 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 ARHGAP42A6NI28 874 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 DFFAO00273 331 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 DAPK3O43293 454 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 LDOC1O95751 146 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 MYF5P13349 255 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 DGKAP23743 735 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 IGFALSP35858 605 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 ACADVLP49748 655 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 ARSEP51690 589 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 TAS2R40P59535 323 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 SRLQ86TD4 932 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 PSTKQ8IV42 348 aaKnown RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 RAB7BQ96AH8 199 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 CENPTQ96BT3 561 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 LENG8Q96PV6 779 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 CHP1Q99653 195 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 TCEAL2Q9H3H9 227 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 SUV39H2Q9H5I1 410 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms