RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 CAMK1DQ8IU85 385 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 DEFB119Q8N690 84 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 CNTD1Q8N815 330 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 DNASE2BQ8WZ79 361 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 SPOCK2Q92563 424 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 RUBCNQ92622 972 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 ECHDC3Q96DC8 303 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 NSMCE3Q96MG7 304 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 SDK1Q7Z5N4 2213 aa20.29■□□□□ 0.84
CSNK1E-207ENST00000430335 OTOGLQ3ZCN5 2332 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 A0A1W2PQ67 120 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 BCLAF3A2AJT9 711 aaKnown RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 USP27XA6NNY8 438 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 TRAFD1O14545 582 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 HTRA2O43464 458 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 ZNF189O75820 626 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 CCR5P51681 352 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 TEX44Q53QW1 395 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 ZNF569Q5MCW4 686 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 WDR45BQ5MNZ6 344 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 PEAR1Q5VY43 1037 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 ARMCX6Q7L4S7 300 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 CYP2U1Q7Z449 544 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 SEMA3CQ99985 751 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 KCND1Q9NSA2 647 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 FADS3Q9Y5Q0 445 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 SHROOM3Q8TF72 1996 aa20.28■□□□□ 0.84
CSNK1E-207ENST00000430335 THADAQ6YHU6 1953 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3DA0A087WVF3 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3IA0A087WXS9 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3EA0A087X179 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3KA0A087X1G2 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TTC24A2A3L6 582 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3FA6NER0 549 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3LB9A6J9 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3HP0C7X1 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TIMP2P16035 220 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 PTPN3P26045 913 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 HOXD12P35452 270 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 ABL2P42684 1182 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 EIF3EP60228 445 aaKnown RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 ITKQ08881 620 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 WASHC5Q12768 1159 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3GQ6DHY5 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3CQ6IPX1 549 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 B4GALNT4Q76KP1 1039 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TRIM69Q86WT6 500 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 SLC13A5Q86YT5 568 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 CDKL3Q8IVW4 592 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TBC1D3Q8IZP1 549 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 SLC35F6Q8N357 371 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 ARRDC2Q8TBH0 407 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 HTR3CQ8WXA8 447 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 VAT1Q99536 393 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 SEPT10Q9P0V9 454 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 NCDNQ9UBB6 729 aa20.27■□□□□ 0.84
CSNK1E-207ENST00000430335 TCRBV7S2A1N4TA0A589 114 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 MEI4A8MW99 385 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 H7C0C1 242 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 AREL1O15033 823 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 LRP3O75074 770 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 IGHV4-34P06331 123 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 RBP3P10745 1247 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 ITPKAP23677 461 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 ATP5OP48047 213 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 DSC2Q02487 901 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 CREB5Q02930 508 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 PLA2G2CQ5R387 149 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 CFAP58Q5T655 872 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 TTC7BQ86TV6 843 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 ZSCAN30Q86W11 494 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 SYT12Q8IV01 421 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 BIRC7Q96CA5 298 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 TEKT5Q96M29 485 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 FERMT1Q9BQL6 677 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 FRMD8P1Q9BZ68 369 aaPredicted RBP20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 ARRDC1-AS1Q9H2J1 176 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 PILRBQ9UKJ0 227 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 TTLL3Q9Y4R7 772 aa20.26■□□□□ 0.83
CSNK1E-207ENST00000430335 ZFHX2Q9C0A1 2572 aaPredicted RBP20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 UPK3BL1B0FP48 263 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 UPK3BL2E5RIL1 263 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 ENC1O14682 589 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 SPINT1O43278 529 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 LATO43561 262 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 TSPAN6O43657 245 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 GFRA3O60609 400 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 FSBPO95073 299 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 SERPINF2P08697 491 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 RBL1P28749 1068 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 NUDT1P36639 197 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 MPLP40238 635 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 POLR2LP62875 67 aaKnown RBP20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 NIPAL4Q0D2K0 466 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 TRAF2Q12933 501 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 UGP2Q16851 508 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 ZSWIM9Q86XI8 627 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 PIGKQ92643 395 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms