RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 HDAC3O15379 428 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MATKP42679 507 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 C21orf59P57076 290 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 NEDD8Q15843 81 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 HYIQ5T013 277 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RBFAQ8N0V3 343 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 TCAIMQ8N3R3 496 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 KBTBD8Q8NFY9 601 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 KAT5Q92993 513 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RCOR3Q9P2K3 495 aaPredicted RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 COQ6Q9Y2Z9 468 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 FSBPO95073 299 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 PLK1P53350 603 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 NAGLUP54802 743 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 LGALS3BPQ08380 585 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 VGLL4Q14135 290 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RAET1GQ6H3X3 334 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 SPACA7Q96KW9 195 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 AVILO75366 819 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 MFN2O95140 757 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 LYPLA2O95372 231 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 NUDT17P0C025 328 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 TFEBP19484 476 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 MARSP56192 900 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 BROXQ5VW32 411 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 PAIP1Q9H074 479 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 PDK4Q16654 411 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 EARS2Q5JPH6 523 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ARMC8Q8IUR7 673 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SMYD1Q8NB12 490 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 BHLHE22Q8NFJ8 381 aaPredicted RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 EEF1AKMT1Q8WVE0 214 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 TEFMQ96QE5 360 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 ZNF607Q96SK3 696 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SOHLH2Q9NX45 425 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 IDO1P14902 403 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 BMP7P18075 431 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ADSSP30520 456 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 RPL22P35268 128 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ZACNQ401N2 412 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 GPR180Q86V85 440 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 MFSD1Q9H3U5 465 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 PRPF19Q9UMS4 504 aaKnown RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 SLC12A4Q9UP95 1085 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 BBIP1A8MTZ0 92 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ADM5C9JUS6 153 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 RFTN2Q52LD8 501 aaPredicted RBP12.88□□□□□ -0.35
LDB3-205ENST00000429277 GALNT18Q6P9A2 607 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ZCCHC23Q6ZST2 131 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 OFCC1Q8IZS5 231 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SPPL2BQ8TCT7 592 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ART4Q93070 314 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SEMA3CQ99985 751 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
LDB3-205ENST00000429277 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 USP12O75317 370 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 IFNA16P05015 189 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 FAM153BP0C7A2 387 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 FAM153CQ494X1 144 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 DSELQ8IZU8 1212 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 MRTO4Q9UKD2 239 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 ASTN1O14525 1302 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 OR10H2O60403 315 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 SNX3O60493 162 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 TBL1XO60907 577 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 SLC35G4P0C7Q5 338 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 COX4I1P13073 169 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ALOX12P18054 663 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 GABRB2P47870 512 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 UGT2B15P54855 530 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PSME3P61289 254 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 CDK18Q07002 472 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PTPRNQ16849 979 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms