RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MGME1Q9BQP7 344 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 CPEB1Q9BZB8 566 aaKnown RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 EPC1Q9H2F5 836 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 SEMA4AQ9H3S1 761 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 C6orf106Q9H6K1 298 aaPredicted RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 FZD4Q9ULV1 537 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 R3HDM2Q9Y2K5 976 aaKnown RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 NYNRINQ9P2P1 1898 aaKnown RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 SDK1Q7Z5N4 2213 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 HACD1B0YJ81 288 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 MTSS1O43312 755 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 STK10O94804 968 aaKnown RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 FGGP02679 453 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 ADRB3P13945 408 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 ITIH2P19823 946 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 ADPRHP54922 357 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 FAM193AP78312 1265 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 IFI35P80217 286 aaPredicted RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 ZNF33AQ06730 810 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 XRCC4Q13426 336 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 PRKD1Q15139 912 aaPredicted RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 LYSMD4Q5XG99 296 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 KLK6Q92876 244 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 FOXJ1Q92949 421 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 MS4A14Q96JA4 679 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 ZNF641Q96N77 438 aaPredicted RBP14.71□□□□□ -0.05
SGCE-204ENST00000428696 QKIQ96PU8 341 aaKnown RBP eCLIP14.71□□□□□ -0.052e-6■■■■□ 23.3
SGCE-204ENST00000428696 HDAC8Q9BY41 377 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 ARRDC1-AS1Q9H2J1 176 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 GMEB2Q9UKD1 530 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 PCDHB9Q9Y5E1 797 aa14.71□□□□□ -0.05
SGCE-204ENST00000428696 VPS13AQ96RL7 3174 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 GOLGA8CPA6NN73 597 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 IGLV3-19P01714 112 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 SERPINF2P08697 491 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 TIMP2P16035 220 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 ITPKAP23677 461 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 PTPN3P26045 913 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 CD86P42081 329 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 EPHB1P54762 984 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 POLR2LP62875 67 aaKnown RBP14.7□□□□□ -0.06
SGCE-204ENST00000428696 PCSK7Q16549 785 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 TEX44Q53QW1 395 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 AGBL4Q5VU57 503 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 PMS2CLQ68D20 193 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 CYP2U1Q7Z449 544 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 CNTD1Q8N815 330 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 FAM71DQ8N9W8 422 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 OR2T34Q8NGX1 318 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 FATE1Q969F0 183 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 ZNF419Q96HQ0 510 aaPredicted RBP14.7□□□□□ -0.06
SGCE-204ENST00000428696 ZC3H10Q96K80 434 aaKnown RBP14.7□□□□□ -0.06
SGCE-204ENST00000428696 PBKQ96KB5 322 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.06
SGCE-204ENST00000428696 IL12RB2Q99665 862 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 UBP1Q9NZI7 540 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 EIF2B4Q9UI10 523 aaKnown RBP14.7□□□□□ -0.06
SGCE-204ENST00000428696 ZNF148Q9UQR1 794 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 ITM2BQ9Y287 266 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 ATP8A1Q9Y2Q0 1164 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 RAI2Q9Y5P3 530 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 CKAP5Q14008 2032 aa14.7□□□□□ -0.06
SGCE-204ENST00000428696 ATXN2Q99700 1313 aaKnown RBP14.7□□□□□ -0.06
SGCE-204ENST00000428696 METTL12A8MUP2 240 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 SLC7A4O43246 635 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 RNGTTO60942 597 aaKnown RBP14.69□□□□□ -0.06
SGCE-204ENST00000428696 CES1P23141 567 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 NIPAL4Q0D2K0 466 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 WASHC5Q12768 1159 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 KLF1Q13351 362 aaPredicted RBP14.69□□□□□ -0.06
SGCE-204ENST00000428696 WDR45BQ5MNZ6 344 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 ARMC12Q5T9G4 340 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 KIAA0895LQ68EN5 471 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 LAIR1Q6GTX8 287 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 ERAP2Q6P179 960 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 SLC41A1Q8IVJ1 513 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 TAB3Q8N5C8 712 aaPredicted RBP14.69□□□□□ -0.06
SGCE-204ENST00000428696 SUMF1Q8NBK3 374 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 CADM4Q8NFZ8 388 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 BIRC7Q96CA5 298 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 FEM1CQ96JP0 617 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 NSMCE3Q96MG7 304 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 WDR24Q96S15 920 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 WRAP53Q9BUR4 548 aaKnown RBP14.69□□□□□ -0.06
SGCE-204ENST00000428696 GLOD4Q9HC38 313 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 AMACRQ9UHK6 382 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 DNPEPQ9ULA0 475 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 CHKBQ9Y259 395 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 SHROOM3Q8TF72 1996 aa14.69□□□□□ -0.06
SGCE-204ENST00000428696 CHD5Q8TDI0 1954 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 A0A1W2PQU0 124 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 CTAGE9A4FU28 777 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 SLC31A1O15431 190 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 PLRG1O43660 514 aaKnown RBP14.68□□□□□ -0.06
SGCE-204ENST00000428696 PMPCBO75439 489 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 ABL2P42684 1182 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 TNNT3P45378 269 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms