RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 HS3ST2Q9Y278 367 aa9.3□□□□□ -0.92
LSG1-202ENST00000427461 ARHGEF17Q96PE2 2063 aaPredicted RBP9.3□□□□□ -0.92
LSG1-202ENST00000427461 CDC14CA4D256 554 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 F5H5T6 163 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 NEMP1O14524 444 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 NUDT21O43809 227 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 STK17BO94768 372 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 PMS2P54278 862 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 SRP54P61011 504 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 BST2Q10589 180 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 DPYDQ12882 1025 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 ZRANB3Q5FWF4 1079 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 LRRC73Q5JTD7 316 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 FAM26FQ5R3K3 315 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 TAF8Q7Z7C8 310 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 TAC4Q86UU9 113 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 TP53I13Q8NBR0 393 aaPredicted RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 ASB12Q8WXK4 309 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 KCTD13Q8WZ19 329 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 PDXPQ96GD0 296 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 SERPINB11Q96P15 392 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 PRMT1Q99873 361 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 DPEP2Q9H4A9 486 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 CISHQ9NSE2 258 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
LSG1-202ENST00000427461 DIDO1Q9BTC0 2240 aaKnown RBP9.29□□□□□ -0.92
LSG1-202ENST00000427461 ANKHD1Q8IWZ3 2542 aaKnown RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 B4E171 279 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 PRSS44E7EML9 344 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 TSPAN6O43657 245 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 MMP20O60882 483 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 ZNF821O75541 412 aaPredicted RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 THRAP10827 490 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 ITIH2P19823 946 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 GKP32189 559 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 CSF2RBP32927 897 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 DLSTP36957 453 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 GGCXP38435 758 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 TSPAN7P41732 249 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 STAT5AP42229 794 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 PGDP52209 483 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SNRPFP62306 86 aaKnown RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 CHAF1BQ13112 559 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 IRF4Q15306 451 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SYPL2Q5VXT5 272 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SPECC1LQ69YQ0 1117 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 JMJD6Q6NYC1 403 aaPredicted RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 FBXL22Q6P050 247 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 C22orf39Q6P5X5 142 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 FOXR2Q6PJQ5 311 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SPNS3Q6ZMD2 512 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 CCDC73Q6ZRK6 1079 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SCML4Q8N228 414 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 PDILTQ8N807 584 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 RBM15Q96T37 977 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSG1-202ENST00000427461 BACH2Q9BYV9 841 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 IMPG2Q9BZV3 1241 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 MIS12Q9H081 205 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 SLAMF7Q9NQ25 335 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 MRPL40Q9NQ50 206 aaKnown RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 VPS51Q9UID3 782 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 FBXO2Q9UK22 296 aaPredicted RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 PHTF1Q9UMS5 762 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 TMEM184BQ9Y519 407 aaPredicted RBP9.28□□□□□ -0.92
LSG1-202ENST00000427461 RPS6KL1Q9Y6S9 549 aa9.28□□□□□ -0.92
LSG1-202ENST00000427461 ANKRD36A6QL64 1941 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 ANKUB1A6NFN9 424 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 A8MU76 341 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 KATNA1O75449 491 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 DLGAP3O95886 979 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 TNFP01375 233 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 APOEP02649 317 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 SNRPB2P08579 225 aaKnown RBP9.27□□□□□ -0.93
LSG1-202ENST00000427461 TRIM49P0CI25 452 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 TRIM49CP0CI26 452 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 CASP1P29466 404 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 GCLMP48507 274 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 RAB15P59190 212 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
LSG1-202ENST00000427461 PPP3CAQ08209 521 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 SEMA5AQ13591 1074 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 TRA2AQ13595 282 aaKnown RBP eCLIP9.27□□□□□ -0.93
LSG1-202ENST00000427461 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 CPZQ66K79 652 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 PMF1Q6P1K2 205 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 ZNF438Q7Z4V0 828 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 OR4D9Q8NGE8 314 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 IRGQQ8WZA9 623 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 FUBP1Q96AE4 644 aaKnown RBP9.27□□□□□ -0.93
LSG1-202ENST00000427461 SNRNP40Q96DI7 357 aaKnown RBP9.27□□□□□ -0.93
LSG1-202ENST00000427461 BTN2A3PQ96KV6 586 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 RPRD1AQ96P16 312 aaPredicted RBP9.27□□□□□ -0.93
LSG1-202ENST00000427461 SLC25A23Q9BV35 468 aa9.27□□□□□ -0.93
LSG1-202ENST00000427461 TMEM168Q9H0V1 697 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms