RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ATP13A3Q9H7F0 1226 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 GRPEL1Q9HAV7 217 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 DTLQ9NZJ0 730 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 TRIM10Q9UDY6 481 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 ZFR2Q9UPR6 939 aaKnown RBP18.23■□□□□ 0.51
HERC3-205ENST00000426683 DMTF1Q9Y222 760 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 ITM2BQ9Y287 266 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
HERC3-205ENST00000426683 HEY1Q9Y5J3 304 aa18.23■□□□□ 0.51
HERC3-205ENST00000426683 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 TTC24A2A3L6 582 aaPredicted RBP18.22■□□□□ 0.51
HERC3-205ENST00000426683 NEMP1O14524 444 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 TSPAN6O43657 245 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 TIMP2P16035 220 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 PRLRP16471 622 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 ZFXP17010 805 aaPredicted RBP18.22■□□□□ 0.51
HERC3-205ENST00000426683 XPAP23025 273 aaPredicted RBP18.22■□□□□ 0.51
HERC3-205ENST00000426683 CCNCP24863 283 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 SERPINA4P29622 427 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 CDKN2BP42772 138 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 MAXP61244 160 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 AP1S1P61966 158 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 DYNLT1P63172 113 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 BCL2L1Q07817 233 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 ZNF284Q2VY69 593 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 LRRC73Q5JTD7 316 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 CFAP58Q5T655 872 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 KIAA1161Q6NSJ0 714 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 SPOCD1Q6ZMY3 1216 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 KATNAL2Q8IYT4 538 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 HCAR2Q8TDS4 363 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 KRT35Q92764 455 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 FEM1CQ96JP0 617 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 TSGA13Q96PP4 275 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 MGME1Q9BQP7 344 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 GGT7Q9UJ14 662 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 ANKRD6Q9Y2G4 727 aa18.22■□□□□ 0.51
HERC3-205ENST00000426683 PCDH15Q96QU1 1955 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 TSPAN11A1L157 253 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 GOLGA6L3A6NEY3 463 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 VILLO15195 856 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 MATN3O15232 486 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 SLC31A1O15431 190 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 SPINT1O43278 529 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 ZRANB2O95218 330 aaKnown RBP eCLIP18.21■□□□□ 0.51
HERC3-205ENST00000426683 WNT1P04628 370 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 KRT10P13645 584 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 ITIH2P19823 946 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 CR2P20023 1033 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 CD38P28907 300 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 RPS21P63220 83 aaKnown RBP18.21■□□□□ 0.51
HERC3-205ENST00000426683 HNRNPDQ14103 355 aaKnown RBP18.21■□□□□ 0.51
HERC3-205ENST00000426683 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 TAZQ16635 292 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 KIF19Q2TAC6 998 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 IL27RAQ6UWB1 636 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 NPNTQ6UXI9 565 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 CCDC50Q8IVM0 306 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 CCDC13Q8IYE1 715 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 TEX26Q8N6G2 289 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 CCNYQ8ND76 341 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 MAML1Q92585 1016 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 HDAC11Q96DB2 347 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 NSMCE3Q96MG7 304 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 NUDCD1Q96RS6 583 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 NT5MQ9NPB1 228 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 SCUBE2Q9NQ36 999 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 SNX11Q9Y5W9 270 aa18.21■□□□□ 0.51
HERC3-205ENST00000426683 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.2■□□□□ 0.5
HERC3-205ENST00000426683 A0A1W2PR77 199 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 DCDC2BA2VCK2 349 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 GRID2IPA4D2P6 1211 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 PRAMEF26H0Y7S4 382 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 AREL1O15033 823 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 OPHN1O60890 802 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 CTNNA1P35221 906 aaKnown RBP18.2■□□□□ 0.5
HERC3-205ENST00000426683 SUOXP51687 545 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 C21orf59P57076 290 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 TFDP2Q14188 446 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 STAT4Q14765 748 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 SLC45A4Q5BKX6 768 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 KAZNQ674X7 775 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 BRAT1Q6PJG6 821 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 ZSWIM9Q86XI8 627 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 PAF1Q8N7H5 531 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 CCDC112Q8NEF3 446 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 EXD1Q8NHP7 514 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 FATE1Q969F0 183 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 SKA1Q96BD8 255 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 RBM41Q96IZ5 413 aaKnown RBP18.2■□□□□ 0.5
HERC3-205ENST00000426683 LGMNQ99538 433 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 MYOCQ99972 504 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 GAREM1Q9H706 876 aa18.2■□□□□ 0.5
HERC3-205ENST00000426683 NOD2Q9HC29 1040 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms