RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 EXOC2Q96KP1 924 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 CAPZA3Q96KX2 299 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 LRFN3Q9BTN0 628 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 AP1M1Q9BXS5 423 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 TM6SF2Q9BZW4 377 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 SP110Q9HB58 689 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 USP29Q9HBJ7 922 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 NT5MQ9NPB1 228 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 CD93Q9NPY3 652 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 DNAAF2Q9NVR5 837 aaKnown RBP5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 SEPT10Q9P0V9 454 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 EVLQ9UI08 416 aaPredicted RBP5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 SARDHQ9UL12 918 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 DNPEPQ9ULA0 475 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 HPCAL4Q9UM19 191 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 DOLKQ9UPQ8 538 aa5.8□□□□□ -1.48
HERPUD2-204ENST00000426180 NYNRINQ9P2P1 1898 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 F5P12259 2224 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CUL9Q8IWT3 2517 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 DOCK4Q8N1I0 1966 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MUC3AQ02505 3323 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ZSCAN5CA6NGD5 496 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PPP1R12AO14974 1030 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 NPC1O15118 1278 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ATXN7O15265 892 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 LIASO43766 372 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 SYNCRIPO60506 623 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ATG13O75143 517 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 LEFTY1O75610 366 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PIGNO95427 931 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 GSRP00390 522 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 HLA-DQB2P05538 268 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 RBP3P10745 1247 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CCNB1P14635 433 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ETS1P14921 441 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PTPN3P26045 913 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ADH6P28332 368 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CASQ1P31415 396 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CHRNA3P32297 505 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CD68P34810 354 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CETN2P41208 172 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MMP13P45452 471 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 KCNJ1P48048 391 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CXCL12P48061 93 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 NR2C2P49116 596 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CCNHP51946 323 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 GDF10P55107 478 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 RHOAP61586 193 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 RPS14P62263 151 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 IFI35P80217 286 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 DSC2Q02487 901 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CSTF1Q05048 431 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 SLC20A2Q08357 652 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 DOC2BQ14184 412 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PDK1Q15118 436 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 OASLQ15646 514 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MYLK3Q32MK0 819 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 HSF5Q4G112 596 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 INO80DQ53TQ3 878 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 SLC45A4Q5BKX6 768 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CARD16Q5EG05 197 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 EOGTQ5NDL2 527 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MARC1Q5VT66 337 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 HEATR6Q6AI08 1181 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ANO7Q6IWH7 933 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 DARS2Q6PI48 645 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 TRMT11Q7Z4G4 463 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 SRLQ86TD4 932 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 LRRC49Q8IUZ0 686 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MMAAQ8IVH4 418 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 C1orf210Q8IVY1 113 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PCDH20Q8N6Y1 951 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 FRMD1Q8N878 549 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 GLIS1Q8NBF1 620 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 MDGA1Q8NFP4 955 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CCDC26Q8TAB7 109 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ARRDC2Q8TBH0 407 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 GRIN3AQ8TCU5 1115 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 TFB1MQ8WVM0 346 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 UBE2Q2Q8WVN8 375 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ISG20Q96AZ6 181 aaKnown RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ARRDC3Q96B67 414 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ZNF599Q96NL3 588 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 IL12RB2Q99665 862 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 GORASP1Q9BQQ3 440 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 TMEM121Q9BTD3 319 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CINPQ9BW66 212 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 TPSD1Q9BZJ3 242 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 CEP44Q9C0F1 390 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 ZDHHC6Q9H6R6 413 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 NOD2Q9HC29 1040 aa5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 PRMT8Q9NR22 394 aaPredicted RBP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 RBM22Q9NW64 420 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERPUD2-204ENST00000426180 DONSONQ9NYP3 566 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms