RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NVLO15381 856 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KDELR3O43731 214 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MMP20O60882 483 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CYP11B1P15538 503 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SLC5A2P31639 672 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CDH5P33151 784 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ADRA1BP35368 520 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 HK3P52790 923 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RHOAP61586 193 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARF5P84085 180 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NRG1Q02297 640 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NFATC3Q12968 1075 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 FGL2Q14314 439 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 DRAP1Q14919 205 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PCSK4Q6UW60 755 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SLC35F3Q8IY50 421 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PRR11Q96HE9 360 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CFAP57Q96MR6 1250 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 EPAS1Q99814 870 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CPEB1Q9BZB8 566 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NDST4Q9H3R1 872 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CATSPERBQ9H7T0 1116 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TMEM248Q9NWD8 314 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SIRPGQ9P1W8 387 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 DKK3Q9UBP4 350 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 U3KQA8 63 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
HLA-DQB3-203ENST00000425319 FREM2Q5SZK8 3169 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ZNF821O75541 412 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GCATO75600 419 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RPLP0P05388 317 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LIPCP11150 499 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NFKBIAP25963 317 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CD82P27701 267 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 UGT1A5P35504 534 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NOP2P46087 812 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 YBEYP58557 167 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 POLR2LP62875 67 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SKOR1P84550 965 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CLN3Q13286 438 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ITPR1Q14643 2758 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 VWA3BQ502W6 1294 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RBFAQ8N0V3 343 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 OR6K2Q8NGY2 324 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LRRN3Q9H3W5 708 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KLQ9UEF7 1012 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 IL17BQ9UHF5 180 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KLF15Q9UIH9 416 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
HLA-DQB3-203ENST00000425319 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NTN3O00634 580 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 AREL1O15033 823 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SPINT1O43278 529 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PLEKP08567 350 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PNLIPP16233 465 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GLB1P16278 677 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 BMP6P22004 513 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ACVRL1P37023 503 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ABL2P42684 1182 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SRP54P61011 504 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CDO1Q16878 200 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 EFHC2Q5JST6 749 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 STRADAQ7RTN6 431 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CCDC74AQ96AQ1 378 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 HMCESQ96FZ2 354 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TUBGCP2Q9BSJ2 902 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 APOOQ9BUR5 198 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SELENOOQ9BVL4 669 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KCTD5Q9NXV2 234 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PISDQ9UG56 409 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MOSPD1Q9UJG1 213 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MFHAS1Q9Y4C4 1052 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KRT3P12035 628 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EPHB2P29323 1055 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GKP32189 559 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCKBRP32239 447 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 IGFALSP35858 605 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FLT3P36888 993 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ATP1A2P50993 1020 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCL7P80098 99 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NFATC4Q14934 902 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms