RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 WDR5P61964 334 aaKnown RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 COG7P83436 770 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 TBL3Q12788 808 aaKnown RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 NXNQ6DKJ4 435 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 TTC9BQ8N6N2 239 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 CCNYL1Q8N7R7 359 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ATAD1Q8NBU5 361 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 TOP1MTQ969P6 601 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 SGF29Q96ES7 293 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ZNF419Q96HQ0 510 aaPredicted RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 NUF2Q9BZD4 464 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 OXSMQ9NWU1 459 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 SLC2A6Q9UGQ3 507 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 SLC27A5Q9Y2P5 690 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 TMEM114B3SHH9 223 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 CAPN15O75808 1086 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ZNF189O75820 626 aaPredicted RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 PIGNO95427 931 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 MYL4P12829 197 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 DSG1Q02413 1049 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 KLF10Q13118 480 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 PCSK7Q16549 785 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 DDR2Q16832 855 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ARL13AQ5H913 290 aaPredicted RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 PM20D1Q6GTS8 502 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 KIAA1841Q6NSI8 718 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ESRP1Q6NXG1 681 aaKnown RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 LINC00523Q86TU6 105 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 FSD1LQ9BXM9 530 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 RHOJQ9H4E5 214 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 S100A14Q9HCY8 104 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 CHCHD3Q9NX63 227 aaKnown RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 SCOCQ9UIL1 159 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 SSX2IPQ9Y2D8 614 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ABHD14A-ACY1A0A1B0GW23 586 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PAGE1O75459 146 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 AHSGP02765 367 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 GABRB3P28472 473 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 GPR15P49685 360 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PGFP49763 221 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 ASPHQ12797 758 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 BTBD8Q5XKL5 378 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 OR6Y1Q8NGX8 325 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 MARK4Q96L34 752 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 LENG8Q96PV6 779 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 GPR22Q99680 433 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 OMDQ99983 421 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 VCXQ9H320 206 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 NDFIP2Q9NV92 336 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 MPP6Q9NZW5 540 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 ARHGAP26Q9UNA1 814 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 AAR2Q9Y312 384 aaKnown RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 TSC2P49815 1807 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 VWA8A3KMH1 1905 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 FKBP6O75344 327 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 SLC35E2BP0CK96 405 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 SP100P23497 879 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 CHRNA4P43681 627 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 NUMBP49757 651 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 NUDT2P50583 147 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 CCNIQ14094 377 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PCID2Q5JVF3 399 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 LIPMQ5VYY2 423 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 SEL1L3Q68CR1 1132 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 RSPO2Q6UXX9 243 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 ARMCX6Q7L4S7 300 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 SNX32Q86XE0 403 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 PPHLN1Q8NEY8 458 aaKnown RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 ZSCAN18Q8TBC5 510 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 ACTRT2Q8TDY3 377 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 FCRL2Q96LA5 508 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 ECSITQ9BQ95 431 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 KIFC1Q9BW19 673 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 SLC39A8Q9C0K1 460 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 GLOD4Q9HC38 313 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 RBM22Q9NW64 420 aaKnown RBP eCLIP10.78□□□□□ -0.68
CUX1-205ENST00000425244 CXXC1Q9P0U4 656 aaPredicted RBP10.78□□□□□ -0.68
CUX1-205ENST00000425244 XPR1Q9UBH6 696 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 MID2Q9UJV3 735 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 ZNF232Q9UNY5 417 aa10.78□□□□□ -0.68
CUX1-205ENST00000425244 CCNT2O60583 730 aaKnown RBP10.77□□□□□ -0.68
CUX1-205ENST00000425244 TYMPP19971 482 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 RPL14P50914 215 aaKnown RBP10.77□□□□□ -0.68
CUX1-205ENST00000425244 CDC16Q13042 620 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 SLC12A1Q13621 1099 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 FRG1Q14331 258 aaKnown RBP10.77□□□□□ -0.68
CUX1-205ENST00000425244 CNGA3Q16281 694 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 EML3Q32P44 896 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 LPCAT4Q643R3 524 aa10.77□□□□□ -0.68
CUX1-205ENST00000425244 TMEM198Q66K66 360 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms