RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 TIMM13Q9Y5L4 95 aaPredicted RBP11.21□□□□□ -0.61
TNC-203ENST00000423613 CASKO14936 926 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 ACSL4O60488 711 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 GABBR2O75899 941 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 CAPGP40121 348 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 CCNG2Q16589 344 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 AMIGO2Q86SJ2 522 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 PALB2Q86YC2 1186 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.62
TNC-203ENST00000423613 MTFMTQ96DP5 389 aaKnown RBP11.21□□□□□ -0.62
TNC-203ENST00000423613 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.62
TNC-203ENST00000423613 CISHQ9NSE2 258 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 SETBP1Q9Y6X0 1596 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 A8MUI8 341 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 A8MX80 341 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 H0Y858 1186 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 SMIM22K7EJ46 135 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 F9P00740 461 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 GRB14Q14449 540 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 LPCAT4Q643R3 524 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.62
TNC-203ENST00000423613 TMEM199Q8N511 208 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 RXFP2Q8WXD0 754 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 VPS35Q96QK1 796 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 NEXMIFQ5QGS0 1516 aa11.21□□□□□ -0.62
TNC-203ENST00000423613 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ERI2A8K979 691 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 CTNNB1P35222 781 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 CHKAP35790 457 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ZNF267Q14586 743 aaPredicted RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 HKDC1Q2TB90 917 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SAMD4BQ5PRF9 694 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 CRTC3Q6UUV7 619 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SCAIQ8N9R8 606 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 LPCAT1Q8NF37 534 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 NXNL1Q96CM4 212 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ADGRE3Q9BY15 652 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SETD4Q9NVD3 440 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 KANSL3Q9P2N6 904 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SNX6Q9UNH7 406 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 IRAK3Q9Y616 596 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 RAD54BQ9Y620 910 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 RBMXL2O75526 392 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 JCHAINP01591 159 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 CNTFP26441 200 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ARMC8Q8IUR7 673 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 WDR49Q8IV35 697 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SFRP1Q8N474 314 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 PNPT1Q8TCS8 783 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 TMEM176AQ96HP8 235 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 OSMRQ99650 979 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 METTL8Q9H825 291 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 GPAMQ9HCL2 828 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 NT5MQ9NPB1 228 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 NCKIPSDQ9NZQ3 722 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SLC24A2Q9UI40 661 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 TNFSF13BQ9Y275 285 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 TRMUO75648 421 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 AP2A2O94973 939 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 CLCN2P51788 898 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 NFIAQ12857 509 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 UAP1L1Q3KQV9 507 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 AADACL4Q5VUY2 407 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 C1QTNF7Q9BXJ2 289 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 UBP1Q9NZI7 540 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 HIF3AQ9Y2N7 669 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 WWP2O00308 870 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 LSM8O95777 96 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 NR4A1P22736 598 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 PPP2R1BP30154 601 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SOX10P56693 466 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 IKBKEQ14164 716 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 TPGS1Q6ZTW0 290 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 COLGALT1Q8NBJ5 622 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SUSD6Q92537 303 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 PFDN5Q99471 154 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 PDGFCQ9NRA1 345 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 KLHL28Q9NXS3 571 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 VPS4AQ9UN37 437 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 ACOT9Q9Y305 439 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 A0A087WZ62 844 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 SRRM3A6NNA2 597 aaPredicted RBP11.2□□□□□ -0.62
TNC-203ENST00000423613 CYP2F1P24903 491 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 MAGEA6P43360 314 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 MAPK12P53778 367 aa11.2□□□□□ -0.62
TNC-203ENST00000423613 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms