RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SULT1E1P49888 294 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 OAZ1P54368 228 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 GNA12Q03113 381 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 CTBP1Q13363 440 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 SQLEQ14534 574 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 SLC36A3Q495N2 470 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 KCTD8Q6ZWB6 473 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 STON2Q8WXE9 905 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 RPL10LQ96L21 214 aaKnown RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FTHL17Q9BXU8 183 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FBRSL1Q9HCM7 1045 aaKnown RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ARMC1Q9NVT9 282 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ACOT9Q9Y305 439 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 RNF103-CHMP3A0A140T963 221 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ATP6AP2A0A1C7CYW4 349 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM72CH0Y354 149 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ATP6AP2O75787 350 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 PRKAA2P54646 552 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 GJA9P57773 515 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 GALNT2Q10471 571 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 TRAF2Q12933 501 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 OTUD1Q5VV17 481 aaPredicted RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 KCTD11Q693B1 232 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 EFCAB12Q6NXP0 572 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 CAMK1DQ8IU85 385 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 DEFB106AQ8N104 65 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 SHCBP1Q8NEM2 672 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ZBED3Q96IU2 234 aaPredicted RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 UPF3AQ9H1J1 476 aaKnown RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 NCKIPSDQ9NZQ3 722 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 OAZ3Q9UMX2 235 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 PSME4Q14997 1843 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 NRP2O60462 931 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ARIH2O95376 493 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 CYP2B6P20813 491 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 OXTRP30559 389 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 HOXD12P35452 270 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 PLK1P53350 603 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ZBTB17Q13105 803 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 CYP2A13Q16696 494 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 C8orf82Q6P1X6 216 aaPredicted RBP16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 RETREG3Q86VR2 466 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ZNF280CQ8ND82 737 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ZNF420Q8TAQ5 688 aaPredicted RBP16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ACDQ96AP0 544 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM149B1Q96BN6 582 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 TRIM8Q9BZR9 551 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ASB7Q9H672 318 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 TMEM247A6NEH6 219 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 PTPRAP18433 802 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 POLR2IP36954 125 aaKnown RBP16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 SPIDRQ14159 915 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 NR1D2Q14995 579 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 SLC15A3Q8IY34 581 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 OR6B3Q8NGW1 331 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 CHPT1Q8WUD6 406 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 AFG1LQ8WV93 481 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 DCPSQ96C86 337 aaKnown RBP16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 SLX1AQ9BQ83 275 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 AGPAT4Q9NRZ5 378 aa16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 CCM2LQ9NUG4 571 aaPredicted RBP16.81■□□□□ 0.28
NPC1L1-203ENST00000423141 NUP205Q92621 2012 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 C9JVG2 144 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 NME4O00746 187 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 CLOCKO15516 846 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 SULT1C4O75897 302 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 NFKB1P19838 968 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 MATN1P21941 496 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 MLLT10P55197 1068 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 MTA1Q13330 715 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 FRG1Q14331 258 aaKnown RBP16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 PLCL1Q15111 1095 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 MAPRE2Q15555 327 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 INTS11Q5TA45 600 aaKnown RBP16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 SIX6OS1Q8N1H7 587 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 FAM167AQ96KS9 214 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 HNRNPABQ99729 332 aaKnown RBP16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 DHRS12A0PJE2 317 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 EI24O14681 340 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 B4GAT1O43505 415 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 NPHS1O60500 1241 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 CDH3P22223 829 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 IGBP1P78318 339 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 NFATC3Q12968 1075 aa16.8■□□□□ 0.28
NPC1L1-203ENST00000423141 PPIL2Q13356 520 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms