RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 H3BM21 787 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 AREL1O15033 823 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 LZTS3O60299 673 aaPredicted RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 BUB1BO60566 1050 aaPredicted RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 PRAMEF11O60813 436 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 LRCH4O75427 683 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 NEBLO76041 1014 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 CSF2P04141 144 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 CAPNS1P04632 268 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 PRKCGP05129 697 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 MYBL1P10243 752 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 JUNDP17535 347 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 AMPD1P23109 780 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 HNF1BP35680 557 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUP50-206ENST00000422489 ZBED6P86452 979 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 ILKQ13418 452 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 C1orf61Q13536 156 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 PROX2Q3B8N5 592 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 BOLA3Q53S33 107 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 FIGNQ5HY92 759 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 FAXCQ5TGI0 409 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 HES3Q5TGS1 186 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 ERAP2Q6P179 960 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 ZSCAN30Q86W11 494 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 SLC22A18ASQ8N1D0 253 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 OR4C6Q8NH72 309 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 HNRNPLLQ8WVV9 542 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 ASB12Q8WXK4 309 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 EIF3CQ99613 913 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 CINPQ9BW66 212 aaPredicted RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 C1QTNF7Q9BXJ2 289 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 CPEB1Q9BZB8 566 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 ABCG4Q9H172 646 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 ISCUQ9H1K1 167 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 SP110Q9HB58 689 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 MBNL1Q9NR56 388 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 IFNKQ9P0W0 207 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 DKK3Q9UBP4 350 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 RAXQ9Y2V3 346 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 COQ6Q9Y2Z9 468 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 LUC7L2Q9Y383 392 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 BZW2Q9Y6E2 419 aaKnown RBP9.39□□□□□ -0.91
NUP50-206ENST00000422489 CEP295Q9C0D2 2601 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 CPED1A4D0V7 1026 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 A8MX80 341 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 H3BRJ5 948 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 K7ESM1 405 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 SCAMP1O15126 338 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 SPINT1O43278 529 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 MT-CO3P00414 261 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 SERPING1P05155 500 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ACP1P24666 158 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 ARL4AP40617 200 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 RGRP47804 291 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 HCAR3P49019 387 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 SCNN1BP51168 640 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 DUSP3P51452 185 aaPredicted RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 SUOXP51687 545 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ADKP55263 362 aaKnown RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 E2F1Q01094 437 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 BCL2L1Q07817 233 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 IL10RBQ08334 325 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ELP6Q0PNE2 266 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PTK2BQ14289 1009 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 GRM3Q14832 879 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 UGP2Q16851 508 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 SMTNL2Q2TAL5 461 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 DEFB133Q30KQ1 61 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 TPRG1LQ5T0D9 272 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PSTKQ8IV42 348 aaKnown RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 TSEN2Q8NCE0 465 aaKnown RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 HCAR2Q8TDS4 363 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 FNIP1Q8TF40 1166 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 BTN2A2Q8WVV5 523 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 VOPP1Q96AW1 172 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 CENPTQ96BT3 561 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 APOLD1Q96LR9 279 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ZNF641Q96N77 438 aaPredicted RBP9.38□□□□□ -0.91
NUP50-206ENST00000422489 THAP2Q9H0W7 228 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 ATP13A3Q9H7F0 1226 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PDFQ9HBH1 243 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 CAPN11Q9UMQ6 739 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 EPG5Q9HCE0 2579 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PI4KAP42356 2102 aa9.38□□□□□ -0.91
NUP50-206ENST00000422489 PLXNA2O75051 1894 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms