RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	DKK3	Q9UBP4	350 aa		18.8	■□□□□ 0.6
DDR1-233	ENST00000421124	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-233	ENST00000421124	ATXN2	Q99700	1313 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	EP300	Q09472	2414 aa	Predicted RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	KCNK1	O00180	336 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	GJB3	O75712	270 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	TJP3	O95049	919 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	HOXD12	P35452	270 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	CCR5	P51681	352 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	ITK	Q08881	620 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	RPS6KA1	Q15418	735 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	PLA2G2C	Q5R387	149 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	CFAP58	Q5T655	872 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	CAMK1D	Q8IU85	385 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	REXO1L1P	Q8IX06	675 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	HCAR2	Q8TDS4	363 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	TFB1M	Q8WVM0	346 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	DNASE2B	Q8WZ79	361 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	RAB7B	Q96AH8	199 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	BIRC7	Q96CA5	298 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	IL12RB2	Q99665	862 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	POLR1E	Q9GZS1	481 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	NOD2	Q9HC29	1040 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	PILRB	Q9UKJ0	227 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	TPX2	Q9ULW0	747 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	TRPM6	Q9BX84	2022 aa		18.79	■□□□□ 0.6
DDR1-233	ENST00000421124	DMD	P11532	3685 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	TSPAN11	A1L157	253 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	TTC24	A2A3L6	582 aa	Predicted RBP	18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	C10orf142	B7Z368	130 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	AP1G1	O43747	822 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	JCHAIN	P01591	159 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	IGHV4-34	P06331	123 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	MAOB	P27338	520 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	ABL2	P42684	1182 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	ZBTB17	Q13105	803 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	PRKD1	Q15139	912 aa	Predicted RBP	18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	NOMO1	Q15155	1222 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	CCDC6	Q16204	474 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	SEL1L2	Q5TEA6	688 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	ALG1L	Q6GMV1	187 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	NEK5	Q6P3R8	708 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	B4GALNT4	Q76KP1	1039 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	VPS45	Q9NRW7	570 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	TMEM74B	Q9NUR3	256 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	SEPT10	Q9P0V9	454 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	EIF2B4	Q9UI10	523 aa	Known RBP	18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	ATP8A1	Q9Y2Q0	1164 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	FADS3	Q9Y5Q0	445 aa		18.78	■□□□□ 0.6
DDR1-233	ENST00000421124	PIEZO1	Q92508	2521 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	GOLGA6L9	A6NEM1	432 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	HACD1	B0YJ81	288 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	SOCS5	O75159	536 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	HLA-DQB2	P05538	268 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	CES1	P23141	567 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	PPP2CB	P62714	309 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	PPP2CA	P67775	309 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	OTUD4	Q01804	1114 aa	Known RBP	18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	XRCC4	Q13426	336 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	CSRP2	Q16527	193 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	BRAT1	Q6PJG6	821 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	RABEPK	Q7Z6M1	372 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	TTC7B	Q86TV6	843 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	ZC3H18	Q86VM9	953 aa	Known RBP	18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	TRIM69	Q86WT6	500 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	GPR161	Q8N6U8	529 aa	Known RBP	18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	PAF1	Q8N7H5	531 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	ACTL9	Q8TC94	416 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	NSMCE3	Q96MG7	304 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	QKI	Q96PU8	341 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	SEMA3C	Q99985	751 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	MIR1-1HG	Q9H1L0	117 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	PARD6A	Q9NPB6	346 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	SEMA4G	Q9NTN9	838 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	SUSD2	Q9UGT4	822 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	TTLL3	Q9Y4R7	772 aa		18.77	■□□□□ 0.6
DDR1-233	ENST00000421124	ZNF292	O60281	2723 aa		18.77	■□□□□ 0.59
DDR1-233	ENST00000421124	LRRK1	Q38SD2	2015 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	TP53BP1	Q12888	1972 aa	Predicted RBP	18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	TRAFD1	O14545	582 aa	Predicted RBP	18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	MTSS1	O43312	755 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	RNGTT	O60942	597 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	PCDH8	O95206	1070 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	ZNF806	P0C7X5	589 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	GNS	P15586	552 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	TIMP2	P16035	220 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	XPA	P23025	273 aa	Predicted RBP	18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	CD27	P26842	260 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	SUOX	P51687	545 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	DSC2	Q02487	901 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC45A4	Q5BKX6	768 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	CEP76	Q8TAP6	659 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	ECHDC3	Q96DC8	303 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	CARD9	Q9H257	536 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	SMOC1	Q9H4F8	434 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	TRMT1	Q9NXH9	659 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	PCDHGC4	Q9Y5F7	938 aa		18.76	■□□□□ 0.59
DDR1-233	ENST00000421124	ADAMTS9	Q9P2N4	1935 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms