RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 DSELQ8IZU8 1212 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ALG3Q92685 438 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SQORQ9Y6N5 450 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 UNC13BO14795 1591 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 FOXO6A8MYZ6 492 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 MATN2O00339 956 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 NRP2O60462 931 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 MAGEC1O60732 1142 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CKMP06732 381 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CHRNGP07510 517 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 USP17L7P0C7H9 530 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 MFSD5Q6N075 450 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 TBC1D21Q8IYX1 336 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CDYL2Q8N8U2 506 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 N6AMT1Q9Y5N5 214 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 U3KQV3 271 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ITGA2P17301 1181 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 DGKAP23743 735 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 IL17AQ16552 155 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 FSCN1Q16658 493 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 FAM183BPQ6ZVS7 135 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RASGEF1CQ8N431 466 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PPP3R2Q96LZ3 170 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SNX6Q9UNH7 406 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 BUD23O43709 281 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 GTF2E2P29084 291 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RAB25P57735 213 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RALGDSQ12967 914 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PRKG2Q13237 762 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 NKAPQ8N5F7 415 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SMARCD1Q96GM5 515 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SNRNP25Q9BV90 132 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PLLPQ9Y342 182 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CLUHO75153 1309 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 A8MX80 341 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ADRB2P07550 413 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ADSLP30566 484 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ARF5P84085 180 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 HYIQ5T013 277 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PACS1Q6VY07 963 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 RAB43Q86YS6 212 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 OSMRQ99650 979 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 TMX2Q9Y320 296 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 TP73O15350 636 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 IDO1P14902 403 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PBX1P40424 430 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 CNPY1Q3B7I2 92 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 CYP20A1Q6UW02 462 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 C1orf186Q6ZWK4 172 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 TRIM74Q86UV6 250 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 POMGNT2Q8NAT1 580 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 RNASE11Q8TAA1 199 aaKnown RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 SLC38A2Q96QD8 506 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 CAB39LQ9H9S4 337 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 KCNH4Q9UQ05 1017 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 MYL9P24844 172 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 KLHL24Q6TFL4 600 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 CMC1Q7Z7K0 106 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 GALNT5Q7Z7M9 940 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ERLEC1Q96DZ1 483 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PARK7Q99497 189 aaKnown RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 MLPHQ9BV36 600 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 OR6A2O95222 327 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 MPSTP25325 297 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PEX2P28328 305 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PTPN5P54829 565 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PTCHD4Q6ZW05 846 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 NELL1Q92832 810 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 ASB7Q9H672 318 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 DLC1Q96QB1 1528 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 AZIN1O14977 448 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 NDUFB5O43674 189 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 EPORP19235 508 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 CD86P42081 329 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 GPRIN3Q6ZVF9 776 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 MRPS31Q92665 395 aaKnown RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 POLR1EQ9GZS1 481 aaKnown RBP12.43□□□□□ -0.42
CLCN4-203ENST00000421085 SP140LQ9H930 580 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 GIN1Q9NXP7 522 aa12.43□□□□□ -0.42
CLCN4-203ENST00000421085 A0A0J9YYE9 177 aa12.42□□□□□ -0.42
CLCN4-203ENST00000421085 AGPSO00116 658 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms