RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 IFT20Q8IY31 132 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ART4Q93070 314 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 TUBGCP5Q96RT8 1024 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ZDHHC6Q9H6R6 413 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
TMEM53-206ENST00000420706 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ANAPC5Q9UJX4 755 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 RAI2Q9Y5P3 530 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ANKRD36A6QL64 1941 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 LOC285095A0A1B0GVY8 99 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 SMAPO00193 183 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 STK25O00506 426 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 TRAFD1O14545 582 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 NDC80O14777 642 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ALOX15BO15296 676 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 HTRA2O43464 458 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 FZD6O60353 706 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 SYNCRIPO60506 623 aaKnown RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 LEFTY1O75610 366 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 TMEM63AO94886 807 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 PIGNO95427 931 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 AGTP01019 485 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 PRLP01236 227 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 EPOP01588 193 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 APRTP07741 180 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 HOXB2P14652 356 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 COL9A1P20849 921 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CDK18Q07002 472 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 OLIG2Q13516 323 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 GAS6Q14393 721 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ELAVL3Q14576 367 aaKnown RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 PCSK7Q16549 785 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 KIAA1211LQ6NV74 962 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ZDHHC24Q6UX98 284 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 RANBP10Q6VN20 620 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 Q6ZS52 159 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 MCUQ8NE86 351 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 IPMKQ8NFU5 416 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 PRCCQ92733 491 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ERLEC1Q96DZ1 483 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 TRIB3Q96RU7 358 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 TDRD1Q9BXT4 1180 aaKnown RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ATP13A3Q9H7F0 1226 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CD248Q9HCU0 757 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 PPM1HQ9ULR3 514 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CHKBQ9Y259 395 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-206ENST00000420706 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
TMEM53-206ENST00000420706 SOCS5O75159 536 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 USP12O75317 370 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 PRNPP04156 253 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 UGT2B4P06133 528 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 PDHA1P08559 390 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 SERPINA4P29622 427 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 GRIA1P42261 906 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
TMEM53-206ENST00000420706 COPAP53621 1224 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 PLTPP55058 493 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 CDK16Q00536 496 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 CAV1Q03135 178 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 STARD3Q14849 445 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 NAPEPLDQ6IQ20 393 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 TMEM92Q6UXU6 159 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
TMEM53-206ENST00000420706 PJA1Q8NG27 643 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 OR2T3Q8NH03 318 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 GRIN3AQ8TCU5 1115 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 IFT43Q96FT9 208 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 FEM1CQ96JP0 617 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 TBL1YQ9BQ87 522 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 APOL2Q9BQE5 337 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 RSPH9Q9H1X1 276 aaPredicted RBP12.6□□□□□ -0.39
TMEM53-206ENST00000420706 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
TMEM53-206ENST00000420706 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
TMEM53-206ENST00000420706 GOLGA8MH3BSY2 632 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ATG13O75143 517 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms