RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SEMA3CQ99985 751 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 POLR1EQ9GZS1 481 aaKnown RBP20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 PREBQ9HCU5 417 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 SEPT10Q9P0V9 454 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 ATP8A1Q9Y2Q0 1164 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 PCDHGA5Q9Y5G8 931 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 TRPM6Q9BX84 2022 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 WDR87Q6ZQQ6 2873 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 TSPAN11A1L157 253 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 GOLGA6L9A6NEM1 432 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 KCNK3O14649 394 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 MTSS1O43312 755 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 ITPKAP23677 461 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 ABL2P42684 1182 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 DSC2Q02487 901 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 CREB5Q02930 508 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 ITKQ08881 620 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 KLF1Q13351 362 aaPredicted RBP20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 SLC45A4Q5BKX6 768 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 ZNF569Q5MCW4 686 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 SYCP2LQ5T4T6 812 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 CNTD1Q8N815 330 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 HCAR2Q8TDS4 363 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 RUBCNQ92622 972 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 JRKLQ9Y4A0 524 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 TTLL3Q9Y4R7 772 aa20.85■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3DA0A087WVF3 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3IA0A087WXS9 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3EA0A087X179 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3KA0A087X1G2 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TCRBV7S2A1N4TA0A589 114 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3FA6NER0 549 aaPredicted RBP20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3LB9A6J9 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 H7C0C1 242 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 KIF5CO60282 957 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 GFRA3O60609 400 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 FSBPO95073 299 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3HP0C7X1 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 CES1P23141 567 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 MPLP40238 635 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 ATP5OP48047 213 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 CCR5P51681 352 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 PPP2CBP62714 309 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 PPP2CAP67775 309 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 WDR45BQ5MNZ6 344 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 CFAP58Q5T655 872 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3GQ6DHY5 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3CQ6IPX1 549 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 BRAT1Q6PJG6 821 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TBC1D3Q8IZP1 549 aaPredicted RBP20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 TTC13Q8NBP0 860 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 SNX19Q92543 992 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 PIGKQ92643 395 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 RAB7BQ96AH8 199 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 BIRC7Q96CA5 298 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 ECHDC3Q96DC8 303 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 FAM118BQ9BPY3 351 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 CEP41Q9BYV8 373 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 ARRDC1-AS1Q9H2J1 176 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 FADS3Q9Y5Q0 445 aa20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 PTPRZ1P23471 2315 aaPredicted RBP20.84■□□□□ 0.93
HMGXB4-203ENST00000420166 GVINP1Q7Z2Y8 2422 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 TRAFD1O14545 582 aaPredicted RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 HTRA2O43464 458 aaPredicted RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 AP1G1O43747 822 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 SOCS5O75159 536 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 IGHV4-34P06331 123 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 TIMP2P16035 220 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 MSNP26038 577 aaKnown RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 PTPN3P26045 913 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 DPP6P42658 865 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 EIF3EP60228 445 aaKnown RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 NIPAL4Q0D2K0 466 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 TEX44Q53QW1 395 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 TRIM69Q86WT6 500 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 ZSWIM9Q86XI8 627 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 SLC13A5Q86YT5 568 aaPredicted RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 SYT12Q8IV01 421 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 CDKL3Q8IVW4 592 aaPredicted RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 SLC35F6Q8N357 371 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 ARRDC2Q8TBH0 407 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 DNASE2BQ8WZ79 361 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 PILRBQ9UKJ0 227 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 TPX2Q9ULW0 747 aaKnown RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 R3HDM2Q9Y2K5 976 aaKnown RBP20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 FRYLO94915 3013 aa20.83■□□□□ 0.93
HMGXB4-203ENST00000420166 CACNA1EQ15878 2313 aa20.83■□□□□ 0.92
HMGXB4-203ENST00000420166 ATXN2Q99700 1313 aaKnown RBP20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 PLXNA2O75051 1894 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 UPK3BL1B0FP48 263 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 UPK3BL2E5RIL1 263 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 ENC1O14682 589 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 AREL1O15033 823 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 SPINT1O43278 529 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 LRP3O75074 770 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 RBP3P10745 1247 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 XPAP23025 273 aaPredicted RBP20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 MAOBP27338 520 aa20.82■□□□□ 0.92
HMGXB4-203ENST00000420166 HOXD12P35452 270 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms