RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 HDAC8Q9BY41 377 aa13.51□□□□□ -0.25
TMEM248-203ENST00000418375 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
TMEM248-203ENST00000418375 BRD8Q9H0E9 1235 aa13.51□□□□□ -0.25
TMEM248-203ENST00000418375 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
TMEM248-203ENST00000418375 SLC6A14Q9UN76 642 aa13.51□□□□□ -0.25
TMEM248-203ENST00000418375 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
TMEM248-203ENST00000418375 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
TMEM248-203ENST00000418375 NUP205Q92621 2012 aa13.51□□□□□ -0.25
TMEM248-203ENST00000418375 PLK4O00444 970 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 GIPC1O14908 333 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 ZSCAN12O43309 604 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 PLRG1O43660 514 aaKnown RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 SERPINF2P08697 491 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 CEACAM1P13688 526 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 CSRP1P21291 193 aaKnown RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 PTPN7P35236 360 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 ATXN3P54252 364 aaPredicted RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 AP1S1P61966 158 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 SHC2P98077 582 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 PPIDQ08752 370 aaKnown RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 CCDC173Q0VFZ6 552 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 CFAP58Q5T655 872 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 AGBL4Q5VU57 503 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 DCAF12L1Q5VU92 463 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 KIAA0895LQ68EN5 471 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 BBS12Q6ZW61 710 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 SRLQ86TD4 932 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 SLC41A1Q8IVJ1 513 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 RGL4Q8IZJ4 473 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 TEX26Q8N6G2 289 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 TRIM58Q8NG06 486 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 ZNF641Q96N77 438 aaPredicted RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 KLHL32Q96NJ5 620 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 MGME1Q9BQP7 344 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 HEMGNQ9BXL5 484 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 OSBPL8Q9BZF1 889 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 C6orf106Q9H6K1 298 aaPredicted RBP13.5□□□□□ -0.25
TMEM248-203ENST00000418375 ATP13A3Q9H7F0 1226 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 PREBQ9HCU5 417 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 AMACRQ9UHK6 382 aa13.5□□□□□ -0.25
TMEM248-203ENST00000418375 EPG5Q9HCE0 2579 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 PLXND1Q9Y4D7 1925 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3DA0A087WVF3 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3IA0A087WXS9 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3EA0A087X179 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3KA0A087X1G2 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3FA6NER0 549 aaPredicted RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 C16orf96A6NNT2 1141 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3LB9A6J9 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 RNF103O00237 685 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 MUSKO15146 869 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 INSIG1O15503 277 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TJP3O95049 919 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 FSBPO95073 299 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3HP0C7X1 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 PYGMP11217 842 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 ADRB3P13945 408 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 CCNB1P14635 433 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SERPINA4P29622 427 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 RGRP47804 291 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SCNN1BP51168 640 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 BCL2L1Q07817 233 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 AP1B1Q10567 949 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 PIP5KL1Q5T9C9 394 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3GQ6DHY5 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3CQ6IPX1 549 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 PARS2Q7L3T8 475 aaKnown RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 TBC1D3Q8IZP1 549 aaPredicted RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 PAF1Q8N7H5 531 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 HCAR2Q8TDS4 363 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 DNASE2BQ8WZ79 361 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SNX19Q92543 992 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 RAB7BQ96AH8 199 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 LGMNQ99538 433 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 GTPBP2Q9BX10 602 aaKnown RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 POLR1EQ9GZS1 481 aaKnown RBP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SUV39H2Q9H5I1 410 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMEM248-203ENST00000418375 DKK3Q9UBP4 350 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 SUSD2Q9UGT4 822 aa13.49□□□□□ -0.25
TMEM248-203ENST00000418375 APOC4-APOC2K7ER74 178 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 PIGNO95427 931 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 APOC2P02655 101 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 GNSP15586 552 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 PECAM1P16284 738 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-203ENST00000418375 XPAP23025 273 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-203ENST00000418375 CES1P23141 567 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 CCR5P51681 352 aa13.48□□□□□ -0.25
TMEM248-203ENST00000418375 SUOXP51687 545 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms