RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 DGKEP52429 567 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 METAP1P53582 386 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 WNT3AP56704 352 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
SEC22C-205ENST00000417572 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 POM121L1PQ3SYA9 428 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 KCTD11Q693B1 232 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 MRGPRX2Q96LB1 330 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 ZNF641Q96N77 438 aaPredicted RBP13.12□□□□□ -0.31
SEC22C-205ENST00000417572 KLHL32Q96NJ5 620 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 PPP1R2P1Q96PQ5 205 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SEC22C-205ENST00000417572 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
SEC22C-205ENST00000417572 CHKBQ9Y259 395 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
SEC22C-205ENST00000417572 ATG2BQ96BY7 2078 aa13.12□□□□□ -0.31
SEC22C-205ENST00000417572 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TCRBV21S2A2A0A5A6 115 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 KPNA3O00505 521 aaPredicted RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PSMD3O43242 534 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 FZD6O60353 706 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 AP2A1O95782 977 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 AGTP01019 485 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PRLP01236 227 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 APRTP07741 180 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PDHA1P08559 390 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 SLC8A1P32418 973 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 MAGEA9P43362 315 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 RPL21P46778 160 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PSMD8P48556 350 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 LMAN1P49257 510 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 CDK18Q07002 472 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 OLIG2Q13516 323 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TRADDQ15628 312 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 CST6Q15828 149 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 DUPD1Q68J44 220 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PDCD6IPQ8WUM4 868 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 CPT1BQ92523 772 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TDRD1Q9BXT4 1180 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 OSBPL1AQ9BXW6 950 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 RAB17Q9H0T7 212 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 DPH5Q9H2P9 285 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 POLMQ9NP87 494 aaPredicted RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 TPX2Q9ULW0 747 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
SEC22C-205ENST00000417572 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
SEC22C-205ENST00000417572 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
SEC22C-205ENST00000417572 MID1O15344 667 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 SOCS5O75159 536 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 USP12O75317 370 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 PGLSO95336 258 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 GABRG2P18507 467 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 NDUFV2P19404 249 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ADRA1AP35348 466 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 KCNJ11Q14654 390 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ZNF805Q5CZA5 627 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ARMC12Q5T9G4 340 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
SEC22C-205ENST00000417572 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ANKRD22Q5VYY1 191 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 IZUMO3Q5VZ72 239 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 BMP8AQ7Z5Y6 402 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ZSWIM9Q86XI8 627 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 TSTD1Q8NFU3 115 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ARRDC3Q96B67 414 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ECHDC3Q96DC8 303 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 SIPA1Q96FS4 1042 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 SNF8Q96H20 258 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 TRIB3Q96RU7 358 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 FICDQ9BVA6 458 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 LRRC40Q9H9A6 602 aa13.1□□□□□ -0.31
SEC22C-205ENST00000417572 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
SEC22C-205ENST00000417572 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
SEC22C-205ENST00000417572 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
SEC22C-205ENST00000417572 BHMG1C9JSJ3 638 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms