RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RECQL5O94762 991 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 EIF4BP23588 611 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 CCR4P51679 360 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 POU5F1Q01860 360 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 GRIK4Q16099 956 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 DSELQ8IZU8 1212 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 EZH1Q92800 747 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 IL22Q9GZX6 179 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 LEF1Q9UJU2 399 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 SLC12A4Q9UP95 1085 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 SAMHD1Q9Y3Z3 626 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 CBFA2T3O75081 653 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 OR56A5P0C7T3 313 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 MYL4P12829 197 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 PEX2P28328 305 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 PRKCIP41743 596 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CBX3Q13185 183 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 RAPSNQ13702 412 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 FAM182AQ5T1J6 154 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CRTC3Q6UUV7 619 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 POPDC2Q9HBU9 364 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 WASF2Q9Y6W5 498 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CHURC1-FNTBB4DL54 471 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CCNKO75909 580 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 STARP49675 285 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 GPAT3Q53EU6 434 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CCDC80Q76M96 950 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 HAS1Q92839 578 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 ADI1Q9BV57 179 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TPK1Q9H3S4 243 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 MARCH7Q9H992 704 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 ANKDD1BA6NHY2 528 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 E7ENX8 843 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TOR1BO14657 336 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CKBP12277 381 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 BNIP1Q12981 228 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 FAM20CQ8IXL6 584 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 LRRC17Q8N6Y2 441 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 RNF157Q96PX1 679 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 ACE2Q9BYF1 805 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 BTNL10A8MVZ5 291 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 H7C4K7 107 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 AGPSO00116 658 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 OVOS1Q6IE37 1185 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 AAGABQ6PD74 315 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 APTXQ7Z2E3 356 aaKnown RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 MAP4K3Q8IVH8 894 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 FAM126AQ9BYI3 521 aaPredicted RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 TRPM5Q9NZQ8 1165 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 SIN3BO75182 1162 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 ATP5F1P24539 256 aaPredicted RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 TGFB2P61812 414 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 ZDHHC17Q8IUH5 632 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 RNASE11Q8TAA1 199 aaKnown RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 ZDHHC6Q9H6R6 413 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 CLDN5O00501 218 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 ENO2P09104 434 aaPredicted RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 PRG2P13727 222 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 HNF4AP41235 474 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 PIK3CGP48736 1102 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 BACE1P56817 501 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 CNPY1Q3B7I2 92 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 STXBP5Q5T5C0 1151 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 RAP1GAP2Q684P5 730 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 PTCHD4Q6ZW05 846 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 TAF8Q7Z7C8 310 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 POMGNT2Q8NAT1 580 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 CCDC3Q9BQI4 270 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
UBR4-205ENST00000417040 S100A9P06702 114 aaKnown RBP12.12□□□□□ -0.47
UBR4-205ENST00000417040 CERCAMQ5T4B2 595 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms