RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CCAR2	Q8N163	923 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ANKRD52	Q8NB46	1076 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	OR2A12	Q8NGT7	310 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	GRIN3A	Q8TCU5	1115 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	NAT6	Q93015	286 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	TSACC	Q96A04	125 aa	Predicted RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	SLC39A13	Q96H72	371 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	MDFI	Q99750	246 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	BLZF1	Q9H2G9	400 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	TNKS2	Q9H2K2	1166 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	MMRN2	Q9H8L6	949 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	MBNL1	Q9NR56	388 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	OLA1	Q9NTK5	396 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	SPAST	Q9UBP0	616 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	CCDC39	Q9UFE4	941 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ERRFI1	Q9UJM3	462 aa	Predicted RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	TSPAN16	Q9UKR8	245 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	NAALADL1	Q9UQQ1	740 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	B3GALT1	Q9Y5Z6	326 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ACTL7A	Q9Y615	435 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	DNHD1	Q96M86	4753 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ZNF106	Q9H2Y7	1883 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ELOA3C	A0A087WX78	387 aa	Predicted RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ELOA3D	A6NLF2	546 aa	Predicted RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	C1QTNF3-AMACR	E9PGA6	284 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	EIF3D	O15371	548 aa	Known RBP eCLIP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	IRAK2	O43187	625 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	B4GAT1	O43505	415 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	DIAPH2	O60879	1101 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	SRC	P12931	536 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	P4HA1	P13674	534 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ALAS2	P22557	587 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	F8A1	P23610	371 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	GK	P32189	559 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	CHRNA3	P32297	505 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	IGFALS	P35858	605 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ELOA3B	Q3SY89	546 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ZC3H12A	Q5D1E8	599 aa	Known RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	LRRC73	Q5JTD7	316 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	SYPL2	Q5VXT5	272 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ARHGAP17	Q68EM7	881 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	LINGO4	Q6UY18	593 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	TIPARP	Q7Z3E1	657 aa	Known RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	TMEM135	Q86UB9	458 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	CHSY1	Q86X52	802 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	CCNJL	Q8IV13	435 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	FAM114A1	Q8IWE2	563 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	SH2D3C	Q8N5H7	860 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	IL22RA1	Q8N6P7	574 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ELOA3	Q8NG57	546 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	DQX1	Q8TE96	717 aa	Known RBP	8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	EEF2KMT	Q96G04	330 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	PSMB7	Q99436	277 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ZSWIM1	Q9BR11	485 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	KRTAP9-9	Q9BYP9	154 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	KRTAP9-4	Q9BYQ2	154 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	UBXN6	Q9BZV1	441 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	LRRC4	Q9HBW1	653 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	ABCC13	Q9NSE7	274 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	DMAC2	Q9NW81	257 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	OR51B4	Q9Y5P0	310 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	FADS3	Q9Y5Q0	445 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	CROCC	Q5TZA2	2017 aa		8.8	□□□□□ -1
NIF3L1-206	ENST00000416651	FBN3	Q75N90	2809 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	MED13L	Q71F56	2210 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	XPO1	O14980	1071 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	VPS4B	O75351	444 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	MOCS3	O95396	460 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	RPN1	P04843	607 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	MPST	P25325	297 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	RABIF	P47224	123 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ATP1A2	P50993	1020 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	CDC20	Q12834	499 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	PTK2B	Q14289	1009 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	FAXC	Q5TGI0	409 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ESRP1	Q6NXG1	681 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	PMF1	Q6P1K2	205 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	C16orf46	Q6P387	395 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	NEK5	Q6P3R8	708 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ERN2	Q76MJ5	926 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	TAC4	Q86UU9	113 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	DCP2	Q8IU60	420 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	UNC45B	Q8IWX7	931 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	C12orf56	Q8IXR9	622 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	CACNA2D3	Q8IZS8	1091 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	DEPDC4	Q8N2C3	294 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ARL10	Q8N8L6	244 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	WDR48	Q8TAF3	677 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	AZIN2	Q96A70	460 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	VOPP1	Q96AW1	172 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	POM121	Q96HA1	1249 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ZSCAN31	Q96LW9	406 aa	Predicted RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	TMEM74	Q96NL1	305 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	IPO9	Q96P70	1041 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	PRMT1	Q99873	361 aa	Known RBP	8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	NUDT22	Q9BRQ3	303 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	FEM1A	Q9BSK4	669 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	NIF3L1	Q9GZT8	377 aa		8.79	□□□□□ -1
NIF3L1-206	ENST00000416651	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	8.79	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms