RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 POP4O95707 220 aaKnown RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 ACVRL1P37023 503 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 YBEYP58557 167 aaPredicted RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 SGCGQ13326 291 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 WHAMMP3Q1A5X7 153 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 PROSER1Q86XN7 944 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 RTL3Q8N8U3 475 aaKnown RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 OR2AP1Q8NGE2 309 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 PARVAQ9NVD7 372 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 KLHL11Q9NVR0 708 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 HS3ST3A1Q9Y663 406 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 CHD6Q8TD26 2715 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 COL5A1P20908 1838 aaPredicted RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 A6NNZ2 444 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 FAM72CH0Y354 149 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 BUB1O43683 1085 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 KDELR3O43731 214 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 PARP15Q460N3 678 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 ZNF805Q5CZA5 627 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 FAM72AQ5TYM5 149 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 FAM72DQ6L9T8 149 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 FAM72BQ86X60 149 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 MCOLN2Q8IZK6 566 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 PDCD7Q8N8D1 485 aaKnown RBP20.77■□□□□ 0.92
PTPRU-203ENST00000415600 IFT43Q96FT9 208 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 GDAP1L1Q96MZ0 367 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 CALN1Q9BXU9 219 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 SLC17A9Q9BYT1 436 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 EVA1BQ9NVM1 165 aa20.77■□□□□ 0.92
PTPRU-203ENST00000415600 KRIT1O00522 736 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 CREB3O43889 395 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 ALPPL2P10696 532 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 IFI16Q16666 785 aaKnown RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 ARTNQ5T4W7 220 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 DHRS13Q6UX07 377 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 CEP112Q8N8E3 955 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 LRRN4CLQ8ND94 238 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 TSC1Q92574 1164 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 KLK6Q92876 244 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 MYOCQ99972 504 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 FADS3Q9Y5Q0 445 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 SAR1BQ9Y6B6 198 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 GOLGA4Q13439 2230 aaKnown RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 ANKRD11Q6UB99 2663 aaPredicted RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 TP53BP1Q12888 1972 aaPredicted RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 NEMP2A6NFY4 417 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 EFCAB8A8MWE9 144 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 IGSF6O95976 241 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 TMEM253P0C7T8 217 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 JUPP14923 745 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 CKMT2P17540 419 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 NAP1L1P55209 391 aaKnown RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 BNIP3Q12983 259 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 TMEM259Q4ZIN3 620 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 RAB6CQ53S08 254 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 INO80DQ53TQ3 878 aaPredicted RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 PTAR1Q7Z6K3 402 aaPredicted RBP20.76■□□□□ 0.91
PTPRU-203ENST00000415600 C1QTNF7Q9BXJ2 289 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 RAB6CQ9H0N0 254 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 NDFIP2Q9NV92 336 aa20.76■□□□□ 0.91
PTPRU-203ENST00000415600 KNTC1P50748 2209 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 C16orf96A6NNT2 1141 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 GZMAP12544 262 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 MYLK3Q32MK0 819 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 SEL1L3Q68CR1 1132 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 ABI3BPQ7Z7G0 1075 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 NCAPGQ9BPX3 1015 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 ISCUQ9H1K1 167 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 DKK4Q9UBT3 224 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 IPO11Q9UI26 975 aaKnown RBP20.75■□□□□ 0.91
PTPRU-203ENST00000415600 FZD10Q9ULW2 581 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 CA5BQ9Y2D0 317 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 PKD1L2Q7Z442 2459 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 ACACAQ13085 2346 aa20.75■□□□□ 0.91
PTPRU-203ENST00000415600 H3BM21 787 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 FPGTO14772 594 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 RABIFP47224 123 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 TPI1P60174 286 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 RPL7AP62424 266 aaKnown RBP20.74■□□□□ 0.91
PTPRU-203ENST00000415600 ZNF211Q13398 564 aaPredicted RBP20.74■□□□□ 0.91
PTPRU-203ENST00000415600 GRM3Q14832 879 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 KYAT3Q6YP21 454 aaKnown RBP20.74■□□□□ 0.91
PTPRU-203ENST00000415600 PARS2Q7L3T8 475 aaKnown RBP20.74■□□□□ 0.91
PTPRU-203ENST00000415600 FZD3Q9NPG1 666 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 ZFR2Q9UPR6 939 aaKnown RBP20.74■□□□□ 0.91
PTPRU-203ENST00000415600 NEU3Q9UQ49 428 aa20.74■□□□□ 0.91
PTPRU-203ENST00000415600 TCRBV5S1A1TA0A578 114 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 SDC3O75056 442 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 RNF8O76064 485 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 TMCC1O94876 653 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 PSMA2P25787 234 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 ACADVLP49748 655 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 SUOXP51687 545 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 RHOAP61586 193 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 HNRNPKP61978 463 aaKnown RBP eCLIP20.73■□□□□ 0.911e-9■■■■□ 25.8
PTPRU-203ENST00000415600 PPP1R15BQ5SWA1 713 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 GDPD4Q6W3E5 623 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 Q6ZSR6 202 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 DENND6BQ8NEG7 585 aa20.73■□□□□ 0.91
PTPRU-203ENST00000415600 OR13H1Q8NG92 308 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms